RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 OTUD7BQ6GQQ9 843 aa20.16■□□□□ 0.82
TMEM41A-201ENST00000296254 OPTNQ96CV9 577 aa20.16■□□□□ 0.82
TMEM41A-201ENST00000296254 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
TMEM41A-201ENST00000296254 ERO1AQ96HE7 468 aa20.15■□□□□ 0.82
TMEM41A-201ENST00000296254 PTPN18Q99952 460 aa20.15■□□□□ 0.82
TMEM41A-201ENST00000296254 ELP3Q9H9T3 547 aa20.15■□□□□ 0.82
TMEM41A-201ENST00000296254 ZNF521Q96K83 1311 aa20.15■□□□□ 0.82
TMEM41A-201ENST00000296254 FBXO33Q7Z6M2 555 aa20.14■□□□□ 0.81
TMEM41A-201ENST00000296254 TMEM39BQ9GZU3 492 aa20.14■□□□□ 0.81
TMEM41A-201ENST00000296254 TCP10L2B9ZVM9 353 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 GRIK5Q16478 980 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 VPS37DQ86XT2 251 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 ANKRD44Q8N8A2 993 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 VGLL2Q8N8G2 317 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 CD99L2Q8TCZ2 262 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 MS4A4AQ96JQ5 239 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 PCDH10Q9P2E7 1040 aa20.13■□□□□ 0.81
TMEM41A-201ENST00000296254 TNNI2P48788 182 aa20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 VGLL4Q14135 290 aa20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 LRRC24Q50LG9 513 aa20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 INTS3Q68E01 1043 aaKnown RBP20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 FAM9BQ8IZU0 186 aa20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 TBC1D22AQ8WUA7 517 aa20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 IQSEC3Q9UPP2 1182 aaPredicted RBP20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 PTPN22Q9Y2R2 807 aa20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 RBBP6Q7Z6E9 1792 aaKnown RBP20.12■□□□□ 0.81
TMEM41A-201ENST00000296254 HDLBPQ00341 1268 aaKnown RBP20.11■□□□□ 0.81
TMEM41A-201ENST00000296254 SP3Q02447 781 aa20.11■□□□□ 0.81
TMEM41A-201ENST00000296254 CHAF1AQ13111 956 aaPredicted RBP20.11■□□□□ 0.81
TMEM41A-201ENST00000296254 CAVIN4Q5BKX8 364 aa20.11■□□□□ 0.81
TMEM41A-201ENST00000296254 CNKSR2Q8WXI2 1034 aa20.11■□□□□ 0.81
TMEM41A-201ENST00000296254 BRI3BPQ8WY22 251 aa20.11■□□□□ 0.81
TMEM41A-201ENST00000296254 PTPRCP08575 1304 aa20.1■□□□□ 0.81
TMEM41A-201ENST00000296254 PDE8BO95263 885 aa20.1■□□□□ 0.81
TMEM41A-201ENST00000296254 CAP1Q01518 475 aa20.1■□□□□ 0.81
TMEM41A-201ENST00000296254 MRPL50Q8N5N7 158 aaKnown RBP20.1■□□□□ 0.81
TMEM41A-201ENST00000296254 TEKT1Q969V4 418 aa20.1■□□□□ 0.81
TMEM41A-201ENST00000296254 ARMC5Q96C12 935 aa20.1■□□□□ 0.81
TMEM41A-201ENST00000296254 EFCC1Q9HA90 598 aa20.1■□□□□ 0.81
TMEM41A-201ENST00000296254 KIF16BQ96L93 1317 aa20.09■□□□□ 0.81
TMEM41A-201ENST00000296254 POTEFA5A3E0 1075 aa20.09■□□□□ 0.81
TMEM41A-201ENST00000296254 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
TMEM41A-201ENST00000296254 MAP3K9P80192 1104 aa20.09■□□□□ 0.81
TMEM41A-201ENST00000296254 CSADQ9Y600 493 aa20.09■□□□□ 0.81
TMEM41A-201ENST00000296254 CCL15-CCL14A0A0B4J2E2 113 aa20.08■□□□□ 0.81
TMEM41A-201ENST00000296254 GTF2A2P52657 109 aa20.08■□□□□ 0.81
TMEM41A-201ENST00000296254 CACNB3P54284 484 aa20.08■□□□□ 0.81
TMEM41A-201ENST00000296254 CCL15Q16663 113 aa20.08■□□□□ 0.81
TMEM41A-201ENST00000296254 KLHDC4Q8TBB5 520 aa20.08■□□□□ 0.81
TMEM41A-201ENST00000296254 OTUD5Q96G74 571 aa20.08■□□□□ 0.81
TMEM41A-201ENST00000296254 ZDHHC15Q96MV8 337 aa20.08■□□□□ 0.81
TMEM41A-201ENST00000296254 KIAA0100Q14667 2235 aaKnown RBP20.08■□□□□ 0.8
TMEM41A-201ENST00000296254 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.8
TMEM41A-201ENST00000296254 MAST3O60307 1309 aa20.07■□□□□ 0.8
TMEM41A-201ENST00000296254 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
TMEM41A-201ENST00000296254 SPDYE5A6NIY4 337 aa20.07■□□□□ 0.8
TMEM41A-201ENST00000296254 BCAMP50895 628 aa20.07■□□□□ 0.8
TMEM41A-201ENST00000296254 PUM3Q15397 648 aaKnown RBP20.07■□□□□ 0.8
TMEM41A-201ENST00000296254 TAF1CQ15572 869 aaPredicted RBP20.07■□□□□ 0.8
TMEM41A-201ENST00000296254 SUGT1Q9Y2Z0 365 aa20.07■□□□□ 0.8
TMEM41A-201ENST00000296254 FGFR2P21802 821 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 FKBP1CQ5VVH2 108 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 FAM83AQ86UY5 434 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 FAM43AQ8N2R8 423 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 MRIQ9BWK5 157 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 ZFYVE28Q9HCC9 887 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 TMOD2Q9NZR1 351 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 SNCAIPQ9Y6H5 919 aa20.06■□□□□ 0.8
TMEM41A-201ENST00000296254 APOBEC3HQ6NTF7 200 aaKnown RBP20.05■□□□□ 0.8
TMEM41A-201ENST00000296254 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
TMEM41A-201ENST00000296254 WRNIP1Q96S55 665 aa20.05■□□□□ 0.8
TMEM41A-201ENST00000296254 USP44Q9H0E7 712 aa20.05■□□□□ 0.8
TMEM41A-201ENST00000296254 IFIT1P09914 478 aaKnown RBP20.04■□□□□ 0.8
TMEM41A-201ENST00000296254 E9PSI1 815 aa20.03■□□□□ 0.8
TMEM41A-201ENST00000296254 HHIPL2Q6UWX4 724 aa20.03■□□□□ 0.8
TMEM41A-201ENST00000296254 ERO1BQ86YB8 467 aa20.03■□□□□ 0.8
TMEM41A-201ENST00000296254 HOOK2Q96ED9 719 aa20.03■□□□□ 0.8
TMEM41A-201ENST00000296254 ZNF333Q96JL9 665 aa20.03■□□□□ 0.8
TMEM41A-201ENST00000296254 ZCCHC17Q9NP64 241 aaKnown RBP20.03■□□□□ 0.8
TMEM41A-201ENST00000296254 CETPP11597 493 aa20.02■□□□□ 0.8
TMEM41A-201ENST00000296254 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.8
TMEM41A-201ENST00000296254 RFX5P48382 616 aaPredicted RBP20.02■□□□□ 0.8
TMEM41A-201ENST00000296254 ARHGEF6Q15052 776 aa20.02■□□□□ 0.8
TMEM41A-201ENST00000296254 ZKSCAN4Q969J2 545 aaPredicted RBP20.02■□□□□ 0.8
TMEM41A-201ENST00000296254 GCC1Q96CN9 775 aa20.02■□□□□ 0.8
TMEM41A-201ENST00000296254 MYH13Q9UKX3 1938 aa20.02■□□□□ 0.79
TMEM41A-201ENST00000296254 EYA2O00167 538 aa20.01■□□□□ 0.79
TMEM41A-201ENST00000296254 IRF6O14896 467 aa20.01■□□□□ 0.79
TMEM41A-201ENST00000296254 PPIL2Q13356 520 aa20.01■□□□□ 0.79
TMEM41A-201ENST00000296254 DCAF15Q66K64 600 aa20.01■□□□□ 0.79
TMEM41A-201ENST00000296254 LPIN2Q92539 896 aa20.01■□□□□ 0.79
TMEM41A-201ENST00000296254 PTCH2Q9Y6C5 1203 aa20.01■□□□□ 0.79
TMEM41A-201ENST00000296254 BTBD19C9JJ37 291 aa20■□□□□ 0.79
TMEM41A-201ENST00000296254 TLR2O60603 784 aa20■□□□□ 0.79
TMEM41A-201ENST00000296254 WDHD1O75717 1129 aaPredicted RBP20■□□□□ 0.79
TMEM41A-201ENST00000296254 SLC5A1P13866 664 aa20■□□□□ 0.79
TMEM41A-201ENST00000296254 EN2P19622 333 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms