RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CASP7P55210 303 aa11.91□□□□□ -0.5
CNOT9-202ENST00000295701 PRKG1Q13976 671 aa11.91□□□□□ -0.5
CNOT9-202ENST00000295701 TWISTNBQ3B726 338 aaPredicted RBP11.91□□□□□ -0.5
CNOT9-202ENST00000295701 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
CNOT9-202ENST00000295701 MED23Q9ULK4 1368 aa11.91□□□□□ -0.5
CNOT9-202ENST00000295701 PITPNM2Q9BZ72 1349 aa11.9□□□□□ -0.5
CNOT9-202ENST00000295701 ITGA6P23229 1130 aa11.9□□□□□ -0.5
CNOT9-202ENST00000295701 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
CNOT9-202ENST00000295701 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
CNOT9-202ENST00000295701 WWC1Q8IX03 1113 aa11.9□□□□□ -0.5
CNOT9-202ENST00000295701 STK31Q9BXU1 1019 aa11.9□□□□□ -0.5
CNOT9-202ENST00000295701 IGHMBP2P38935 993 aaKnown RBP11.89□□□□□ -0.51
CNOT9-202ENST00000295701 FKBP1BP68106 108 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 GTF2IP78347 998 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 PTPN12Q05209 780 aaKnown RBP11.89□□□□□ -0.51
CNOT9-202ENST00000295701 GCKRQ14397 625 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 TTLL5Q6EMB2 1281 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 KIAA0825Q8IV33 1275 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
CNOT9-202ENST00000295701 COA1Q9GZY4 146 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
CNOT9-202ENST00000295701 LEMD3Q9Y2U8 911 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
CNOT9-202ENST00000295701 PCDHAC2Q9Y5I4 1007 aa11.89□□□□□ -0.51
CNOT9-202ENST00000295701 CACNA1FO60840 1977 aa11.88□□□□□ -0.51
CNOT9-202ENST00000295701 ZNF804BA4D1E1 1349 aa11.88□□□□□ -0.51
CNOT9-202ENST00000295701 TAF5LO75529 589 aa11.88□□□□□ -0.51
CNOT9-202ENST00000295701 CSF1RP07333 972 aa11.88□□□□□ -0.51
CNOT9-202ENST00000295701 FLIIQ13045 1269 aa11.88□□□□□ -0.51
CNOT9-202ENST00000295701 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
CNOT9-202ENST00000295701 OGFOD1Q8N543 542 aa11.88□□□□□ -0.51
CNOT9-202ENST00000295701 ZNF296Q8WUU4 475 aaPredicted RBP11.88□□□□□ -0.51
CNOT9-202ENST00000295701 PLA2G12BQ9BX93 195 aa11.88□□□□□ -0.51
CNOT9-202ENST00000295701 CHRNDQ07001 517 aa11.87□□□□□ -0.51
CNOT9-202ENST00000295701 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
CNOT9-202ENST00000295701 CERS5Q8N5B7 392 aa11.87□□□□□ -0.51
CNOT9-202ENST00000295701 DNAAF4Q8WXU2 420 aa11.87□□□□□ -0.51
CNOT9-202ENST00000295701 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
CNOT9-202ENST00000295701 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
CNOT9-202ENST00000295701 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 F6X3S4 739 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 VAMP4O75379 141 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 TM4SF4P48230 202 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 FKBP5Q13451 457 aaPredicted RBP11.86□□□□□ -0.51
CNOT9-202ENST00000295701 MPHOSPH8Q99549 860 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 ANKRD2Q9GZV1 360 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 JAG2Q9Y219 1238 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 A0A1B0GUL6 1792 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 AOX1Q06278 1338 aa11.86□□□□□ -0.51
CNOT9-202ENST00000295701 F8W031 263 aaPredicted RBP11.85□□□□□ -0.51
CNOT9-202ENST00000295701 KCNJ4P48050 445 aa11.85□□□□□ -0.51
CNOT9-202ENST00000295701 PSEN2P49810 448 aa11.85□□□□□ -0.51
CNOT9-202ENST00000295701 FOXO4P98177 505 aa11.85□□□□□ -0.51
CNOT9-202ENST00000295701 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
CNOT9-202ENST00000295701 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
CNOT9-202ENST00000295701 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
CNOT9-202ENST00000295701 HDAC9Q9UKV0 1011 aa11.85□□□□□ -0.51
CNOT9-202ENST00000295701 ANGEL1Q9UNK9 670 aaKnown RBP11.85□□□□□ -0.51
CNOT9-202ENST00000295701 MYO3BQ8WXR4 1341 aa11.85□□□□□ -0.51
CNOT9-202ENST00000295701 ECM29Q5VYK3 1845 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 ANKRD18BA2A2Z9 1011 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 GPR25O00155 361 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 PLIN1O60240 522 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 EVI5O60447 810 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 NF2P35240 595 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 EXOSC9Q06265 439 aaKnown RBP11.84□□□□□ -0.51
CNOT9-202ENST00000295701 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
CNOT9-202ENST00000295701 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 DLGAP5Q15398 846 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 BEND3Q5T5X7 828 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 SPRYD7Q5W111 196 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 APOBEC3FQ8IUX4 373 aaKnown RBP11.83□□□□□ -0.52
CNOT9-202ENST00000295701 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 PRMT6Q96LA8 375 aaPredicted RBP11.83□□□□□ -0.52
CNOT9-202ENST00000295701 DEFB129Q9H1M3 183 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 MYH16Q9H6N6 1097 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 EMILIN3Q9NT22 766 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 IL16Q14005 1332 aa11.83□□□□□ -0.52
CNOT9-202ENST00000295701 CFAP100Q494V2 611 aa11.82□□□□□ -0.52
CNOT9-202ENST00000295701 LMBR1LQ6UX01 489 aa11.82□□□□□ -0.52
CNOT9-202ENST00000295701 SLC10A4Q96EP9 437 aa11.82□□□□□ -0.52
CNOT9-202ENST00000295701 SSC5DA1L4H1 1573 aa11.82□□□□□ -0.52
CNOT9-202ENST00000295701 TK2O00142 265 aa11.81□□□□□ -0.52
CNOT9-202ENST00000295701 IL1R1P14778 569 aa11.81□□□□□ -0.52
CNOT9-202ENST00000295701 FOSBP53539 338 aa11.81□□□□□ -0.52
CNOT9-202ENST00000295701 IFIT5Q13325 482 aaKnown RBP11.81□□□□□ -0.52
CNOT9-202ENST00000295701 NBPF12Q5TAG4 269 aaPredicted RBP11.81□□□□□ -0.52
CNOT9-202ENST00000295701 C15orf52Q6ZUT6 534 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms