RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 MYO1BO43795 1136 aa17.18■□□□□ 0.34
CCT3-201ENST00000295688 CDKL5O76039 1030 aa17.18■□□□□ 0.34
CCT3-201ENST00000295688 TMC6Q7Z403 805 aa17.18■□□□□ 0.34
CCT3-201ENST00000295688 HPS5Q9UPZ3 1129 aa17.18■□□□□ 0.34
CCT3-201ENST00000295688 A0A087WWV3 80 aa17.17■□□□□ 0.34
CCT3-201ENST00000295688 CBFA2T2O43439 604 aa17.17■□□□□ 0.34
CCT3-201ENST00000295688 FAM193AP78312 1265 aa17.17■□□□□ 0.34
CCT3-201ENST00000295688 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
CCT3-201ENST00000295688 TRDNQ13061 729 aa17.17■□□□□ 0.34
CCT3-201ENST00000295688 SLC39A14Q15043 492 aa17.17■□□□□ 0.34
CCT3-201ENST00000295688 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
CCT3-201ENST00000295688 XAGE2Q96GT9 111 aa17.17■□□□□ 0.34
CCT3-201ENST00000295688 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.17■□□□□ 0.344e-6■□□□□ 10.3
CCT3-201ENST00000295688 UBR2Q8IWV8 1755 aa17.17■□□□□ 0.34
CCT3-201ENST00000295688 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
CCT3-201ENST00000295688 OTUD7BQ6GQQ9 843 aa17.16■□□□□ 0.34
CCT3-201ENST00000295688 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
CCT3-201ENST00000295688 FBXW7Q969H0 707 aa17.16■□□□□ 0.34
CCT3-201ENST00000295688 MYH7P12883 1935 aa17.16■□□□□ 0.34
CCT3-201ENST00000295688 PPP6R2O75170 966 aa17.16■□□□□ 0.34
CCT3-201ENST00000295688 HAND2P61296 217 aa17.16■□□□□ 0.34
CCT3-201ENST00000295688 AXDND1Q5T1B0 1012 aaPredicted RBP17.16■□□□□ 0.34
CCT3-201ENST00000295688 PUS3Q9BZE2 481 aaKnown RBP17.16■□□□□ 0.34
CCT3-201ENST00000295688 L2HGDHQ9H9P8 463 aa17.16■□□□□ 0.34
CCT3-201ENST00000295688 CPDO75976 1380 aa17.16■□□□□ 0.34
CCT3-201ENST00000295688 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 PPFIA3O75145 1194 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 PFKFB1P16118 471 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 ATF3P18847 181 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 NAA30Q147X3 362 aaPredicted RBP17.15■□□□□ 0.34
CCT3-201ENST00000295688 KRT222Q8N1A0 295 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 ISCA1Q9BUE6 129 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 GPHNQ9NQX3 736 aaPredicted RBP17.15■□□□□ 0.34
CCT3-201ENST00000295688 NEDD4P46934 1319 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 NCAPHQ15003 741 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 E4F1Q66K89 784 aaPredicted RBP17.15■□□□□ 0.34
CCT3-201ENST00000295688 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
CCT3-201ENST00000295688 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 FOXP2O15409 715 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 A1BGP04217 495 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 C4AP0C0L4 1744 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 SYKP43405 635 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 ANTXR2P58335 489 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 FANCCQ00597 558 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 TRIM28Q13263 835 aaKnown RBP17.14■□□□□ 0.33
CCT3-201ENST00000295688 TAF7LQ5H9L4 462 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 ARMCX5Q6P1M9 558 aa17.14■□□□□ 0.33
CCT3-201ENST00000295688 FAM237AA0A1B0GTK4 181 aa17.13■□□□□ 0.33
CCT3-201ENST00000295688 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
CCT3-201ENST00000295688 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
CCT3-201ENST00000295688 GPAA1O43292 621 aa17.13■□□□□ 0.33
CCT3-201ENST00000295688 TCIRG1Q13488 830 aa17.13■□□□□ 0.33
CCT3-201ENST00000295688 KMT5BQ4FZB7 885 aa17.13■□□□□ 0.33
CCT3-201ENST00000295688 ZCRB1Q8TBF4 217 aaKnown RBP17.13■□□□□ 0.33
CCT3-201ENST00000295688 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
CCT3-201ENST00000295688 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
CCT3-201ENST00000295688 KIF28PB7ZC32 967 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 BIN1O00499 593 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 ADORA1P30542 326 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 ZAP70P43403 619 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
CCT3-201ENST00000295688 CHRNA2Q15822 529 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 ALG1Q9BT22 464 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 PUS7LQ9H0K6 701 aaKnown RBP17.12■□□□□ 0.33
CCT3-201ENST00000295688 DCCP43146 1447 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
CCT3-201ENST00000295688 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.332e-6■□□□□ 9.6
CCT3-201ENST00000295688 MYL5Q02045 173 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
CCT3-201ENST00000295688 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 ZNF512BQ96KM6 892 aaPredicted RBP17.12■□□□□ 0.33
CCT3-201ENST00000295688 HPSEQ9Y251 543 aa17.12■□□□□ 0.33
CCT3-201ENST00000295688 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
CCT3-201ENST00000295688 NKX1-1Q15270 411 aaPredicted RBP17.11■□□□□ 0.33
CCT3-201ENST00000295688 ELF2Q15723 593 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 ELOA2Q8IYF1 753 aaPredicted RBP17.11■□□□□ 0.33
CCT3-201ENST00000295688 TMEM87BQ96K49 555 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 PHLPP2Q6ZVD8 1323 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 CUTAO60888 179 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 CSF1RP07333 972 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 UBASH3AP57075 661 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 TRIM29Q14134 588 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
CCT3-201ENST00000295688 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
CCT3-201ENST00000295688 SRRTQ9BXP5 876 aaKnown RBP17.11■□□□□ 0.33
CCT3-201ENST00000295688 HOOK1Q9UJC3 728 aaKnown RBP17.11■□□□□ 0.33
CCT3-201ENST00000295688 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
CCT3-201ENST00000295688 LMOD1P29536 600 aaPredicted RBP17.1■□□□□ 0.33
CCT3-201ENST00000295688 ETF1P62495 437 aaKnown RBP17.1■□□□□ 0.33
CCT3-201ENST00000295688 TERF2Q15554 542 aa17.1■□□□□ 0.33
CCT3-201ENST00000295688 KRT40Q6A162 431 aa17.1■□□□□ 0.33
CCT3-201ENST00000295688 FBXO38Q6PIJ6 1188 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms