RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 PIH1D3Q9NQM4 214 aaKnown RBP27.48■■□□□ 1.99
LINC01116-201ENST00000295549 LRP2BPQ9P2M1 347 aa27.48■■□□□ 1.99
LINC01116-201ENST00000295549 MAST3O60307 1309 aa27.47■■□□□ 1.99
LINC01116-201ENST00000295549 HDLBPQ00341 1268 aaKnown RBP27.47■■□□□ 1.99
LINC01116-201ENST00000295549 ZNF526Q8TF50 670 aaPredicted RBP27.47■■□□□ 1.99
LINC01116-201ENST00000295549 RRAGCQ9HB90 399 aa27.47■■□□□ 1.99
LINC01116-201ENST00000295549 SHTN1A0MZ66 631 aa27.46■■□□□ 1.99
LINC01116-201ENST00000295549 SERPINA10Q9UK55 444 aa27.46■■□□□ 1.99
LINC01116-201ENST00000295549 EDC3Q96F86 508 aaKnown RBP27.45■■□□□ 1.98
LINC01116-201ENST00000295549 GPBP1L1Q9HC44 474 aaPredicted RBP27.45■■□□□ 1.98
LINC01116-201ENST00000295549 ADARB2Q9NS39 739 aaKnown RBP27.45■■□□□ 1.98
LINC01116-201ENST00000295549 EPHX2P34913 555 aa27.44■■□□□ 1.98
LINC01116-201ENST00000295549 TAF1DQ9H5J8 278 aaPredicted RBP27.44■■□□□ 1.98
LINC01116-201ENST00000295549 MYOZ2Q9NPC6 264 aa27.44■■□□□ 1.98
LINC01116-201ENST00000295549 NMRK2Q9NPI5 230 aa27.44■■□□□ 1.98
LINC01116-201ENST00000295549 RAI14Q9P0K7 980 aa27.44■■□□□ 1.98
LINC01116-201ENST00000295549 GTF3C3Q9Y5Q9 886 aa27.44■■□□□ 1.98
LINC01116-201ENST00000295549 MECOMQ03112 1051 aa27.43■■□□□ 1.98
LINC01116-201ENST00000295549 TMED8Q6PL24 325 aaPredicted RBP27.43■■□□□ 1.98
LINC01116-201ENST00000295549 HHIPL2Q6UWX4 724 aa27.43■■□□□ 1.98
LINC01116-201ENST00000295549 DZIP1Q86YF9 867 aaKnown RBP27.43■■□□□ 1.98
LINC01116-201ENST00000295549 MTMR14Q8NCE2 650 aa27.43■■□□□ 1.98
LINC01116-201ENST00000295549 NSUN4Q96CB9 384 aaKnown RBP27.43■■□□□ 1.98
LINC01116-201ENST00000295549 IDH1O75874 414 aaKnown RBP27.42■■□□□ 1.98
LINC01116-201ENST00000295549 MAP3K12Q12852 859 aa27.42■■□□□ 1.98
LINC01116-201ENST00000295549 SAMD7Q7Z3H4 446 aa27.42■■□□□ 1.98
LINC01116-201ENST00000295549 SCN4AP35499 1836 aa27.42■■□□□ 1.98
LINC01116-201ENST00000295549 USP50Q70EL3 339 aaPredicted RBP27.41■■□□□ 1.98
LINC01116-201ENST00000295549 PNMA8AQ86V59 439 aaPredicted RBP27.41■■□□□ 1.98
LINC01116-201ENST00000295549 SLF2Q8IX21 1173 aa27.41■■□□□ 1.98
LINC01116-201ENST00000295549 ZNF784Q8NCA9 323 aaPredicted RBP27.41■■□□□ 1.98
LINC01116-201ENST00000295549 ZNF384Q8TF68 577 aa27.41■■□□□ 1.98
LINC01116-201ENST00000295549 TEKT1Q969V4 418 aa27.41■■□□□ 1.98
LINC01116-201ENST00000295549 CRKP46108 304 aa27.41■■□□□ 1.98
LINC01116-201ENST00000295549 GSTO1P78417 241 aa27.41■■□□□ 1.98
LINC01116-201ENST00000295549 KBTBD3Q8NAB2 608 aa27.41■■□□□ 1.98
LINC01116-201ENST00000295549 FAM163AQ96GL9 167 aaPredicted RBP27.41■■□□□ 1.98
LINC01116-201ENST00000295549 ZBED3Q96IU2 234 aaPredicted RBP27.41■■□□□ 1.98
LINC01116-201ENST00000295549 MAP4K4O95819 1239 aaPredicted RBP27.4■■□□□ 1.98
LINC01116-201ENST00000295549 EGFRP00533 1210 aa27.4■■□□□ 1.98
LINC01116-201ENST00000295549 DIXDC1Q155Q3 683 aa27.4■■□□□ 1.98
LINC01116-201ENST00000295549 CFAP100Q494V2 611 aa27.4■■□□□ 1.98
LINC01116-201ENST00000295549 TBC1D10BQ4KMP7 808 aaPredicted RBP27.4■■□□□ 1.98
LINC01116-201ENST00000295549 TRPM4Q8TD43 1214 aa27.4■■□□□ 1.98
LINC01116-201ENST00000295549 ZDHHC15Q96MV8 337 aa27.4■■□□□ 1.98
LINC01116-201ENST00000295549 DLGAP5Q15398 846 aa27.39■■□□□ 1.97
LINC01116-201ENST00000295549 KIF4BQ2VIQ3 1234 aa27.39■■□□□ 1.97
LINC01116-201ENST00000295549 EVI5LQ96CN4 794 aa27.39■■□□□ 1.97
LINC01116-201ENST00000295549 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.39■■□□□ 1.97
LINC01116-201ENST00000295549 SPDYE2BA6NHP3 402 aa27.38■■□□□ 1.97
LINC01116-201ENST00000295549 LDHCP07864 332 aa27.38■■□□□ 1.97
LINC01116-201ENST00000295549 SPDYE6P0CI01 402 aa27.38■■□□□ 1.97
LINC01116-201ENST00000295549 RBM5P52756 815 aaKnown RBP eCLIP27.38■■□□□ 1.97
LINC01116-201ENST00000295549 HIRAP54198 1017 aaPredicted RBP27.38■■□□□ 1.97
LINC01116-201ENST00000295549 RBM26Q5T8P6 1007 aaKnown RBP27.38■■□□□ 1.97
LINC01116-201ENST00000295549 TTC22Q5TAA0 569 aa27.38■■□□□ 1.97
LINC01116-201ENST00000295549 NAA16Q6N069 864 aaPredicted RBP27.38■■□□□ 1.97
LINC01116-201ENST00000295549 SKAP1Q86WV1 359 aa27.38■■□□□ 1.97
LINC01116-201ENST00000295549 GAKO14976 1311 aa27.37■■□□□ 1.97
LINC01116-201ENST00000295549 WNT10BO00744 389 aa27.37■■□□□ 1.97
LINC01116-201ENST00000295549 SLC9C2Q5TAH2 1124 aa27.37■■□□□ 1.97
LINC01116-201ENST00000295549 TICAM2Q86XR7 235 aa27.37■■□□□ 1.97
LINC01116-201ENST00000295549 DAGLAQ9Y4D2 1042 aa27.37■■□□□ 1.97
LINC01116-201ENST00000295549 APOBEC3HQ6NTF7 200 aaKnown RBP27.36■■□□□ 1.97
LINC01116-201ENST00000295549 CNTROBQ8N137 903 aa27.36■■□□□ 1.97
LINC01116-201ENST00000295549 MAGEB6Q8N7X4 407 aa27.36■■□□□ 1.97
LINC01116-201ENST00000295549 PRMT6Q96LA8 375 aaPredicted RBP27.36■■□□□ 1.97
LINC01116-201ENST00000295549 MROH7-TTC4A0A0A0MT08 1334 aa27.35■■□□□ 1.97
LINC01116-201ENST00000295549 PDE6AP16499 860 aa27.35■■□□□ 1.97
LINC01116-201ENST00000295549 LRRFIP1Q32MZ4 808 aaKnown RBP27.35■■□□□ 1.97
LINC01116-201ENST00000295549 ZSCAN25Q6NSZ9 544 aa27.35■■□□□ 1.97
LINC01116-201ENST00000295549 ZC3H15Q8WU90 426 aaKnown RBP27.35■■□□□ 1.97
LINC01116-201ENST00000295549 PCDHAC2Q9Y5I4 1007 aa27.35■■□□□ 1.97
LINC01116-201ENST00000295549 TRIM6-TRIM34B2RNG4 842 aa27.34■■□□□ 1.97
LINC01116-201ENST00000295549 GSPT1P15170 499 aaKnown RBP27.34■■□□□ 1.97
LINC01116-201ENST00000295549 RGS3P49796 1198 aa27.34■■□□□ 1.97
LINC01116-201ENST00000295549 NBPF9Q3BBW0 867 aa27.34■■□□□ 1.97
LINC01116-201ENST00000295549 GPR75-ASB3A0A0A6YYF3 556 aa27.33■■□□□ 1.97
LINC01116-201ENST00000295549 CYP7A1P22680 504 aa27.33■■□□□ 1.97
LINC01116-201ENST00000295549 ADD2P35612 726 aa27.33■■□□□ 1.97
LINC01116-201ENST00000295549 EAPPQ56P03 285 aaPredicted RBP27.33■■□□□ 1.97
LINC01116-201ENST00000295549 FSD1Q9BTV5 496 aa27.33■■□□□ 1.97
LINC01116-201ENST00000295549 PGAP2Q9UHJ9 254 aa27.33■■□□□ 1.97
LINC01116-201ENST00000295549 DOCK2Q92608 1830 aa27.33■■□□□ 1.97
LINC01116-201ENST00000295549 TCRBV5S4A2TA0A5A2 114 aa27.33■■□□□ 1.96
LINC01116-201ENST00000295549 KIF3CO14782 793 aa27.33■■□□□ 1.96
LINC01116-201ENST00000295549 ZFYP08048 801 aaPredicted RBP27.33■■□□□ 1.96
LINC01116-201ENST00000295549 UBE3CQ15386 1083 aa27.33■■□□□ 1.96
LINC01116-201ENST00000295549 MYO1BO43795 1136 aa27.32■■□□□ 1.96
LINC01116-201ENST00000295549 ADGRA1Q86SQ6 560 aa27.32■■□□□ 1.96
LINC01116-201ENST00000295549 RILPL2Q969X0 211 aa27.32■■□□□ 1.96
LINC01116-201ENST00000295549 ZNF532Q9HCE3 1301 aa27.31■■□□□ 1.96
LINC01116-201ENST00000295549 RNF113AO15541 343 aaKnown RBP27.31■■□□□ 1.96
LINC01116-201ENST00000295549 SDSP20132 328 aa27.3■■□□□ 1.96
LINC01116-201ENST00000295549 BTDP43251 543 aa27.3■■□□□ 1.96
LINC01116-201ENST00000295549 PPP4CP60510 307 aa27.3■■□□□ 1.96
LINC01116-201ENST00000295549 LDHDQ86WU2 507 aa27.3■■□□□ 1.96
LINC01116-201ENST00000295549 MYO5AQ9Y4I1 1855 aaKnown RBP27.29■■□□□ 1.96
LINC01116-201ENST00000295549 BAG3O95817 575 aa27.29■■□□□ 1.96
LINC01116-201ENST00000295549 POTEIP0CG38 1075 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms