RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 SLURP2P0DP57 97 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 CRKP46108 304 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 SNAP47Q5SQN1 464 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 TXNDC11Q6PKC3 985 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 PDZD3Q86UT5 571 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 IL22RA1Q8N6P7 574 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 GOLM1Q8NBJ4 401 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 GAL3ST3Q96A11 431 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 ARMC5Q96C12 935 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 SOX17Q9H6I2 414 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 UBP1Q9NZI7 540 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 PPP1R1BQ9UD71 204 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 PCDHB5Q9Y5E4 795 aa6.77□□□□□ -1.33
HMGB1P5-201ENST00000255320 M0R082 166 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 TM4SF5O14894 197 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 OIP5O43482 229 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 CABP4P57796 275 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 ZNF252P-AS1Q0IIN9 211 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 SEPT6Q14141 434 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 BNC2Q6ZN30 1099 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 FAM196AQ6ZSG2 479 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 GRIN3AQ8TCU5 1115 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 EDARADDQ8WWZ3 215 aa6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P5-201ENST00000255320 FAM221AA4D161 298 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 FAM177BA6PVY3 158 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 LILRB5O75023 590 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 F13A1P00488 732 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 ATP2B1P20020 1258 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 ARNTP27540 789 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 CDC25BP30305 580 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 SOX9P48436 509 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 PIP4K2BP78356 416 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 GALNT6Q8NCL4 622 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 LRRC3Q9BY71 257 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 PRDM6Q9NQX0 595 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 GINM1Q9NU53 330 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 CYP8B1Q9UNU6 501 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 SAMM50Q9Y512 469 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 PPME1Q9Y570 386 aa6.75□□□□□ -1.33
HMGB1P5-201ENST00000255320 LINC01387J3KSC0 135 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 HOXB4P17483 251 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 AP3B2Q13367 1082 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 LLGL2Q6P1M3 1020 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 CCDC84Q86UT8 332 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 FBXO27Q8NI29 283 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 GATAD2BQ8WXI9 593 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 SLC7A3Q8WY07 619 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 WNT8BQ93098 351 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 SEC16BQ96JE7 1060 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 DNAJC2Q99543 621 aaKnown RBP6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 MIR1-1HGQ9H1L0 117 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 LRRC4BQ9NT99 713 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 CACNA2D2Q9NY47 1150 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 EFR3BQ9Y2G0 817 aa6.74□□□□□ -1.33
HMGB1P5-201ENST00000255320 ECEL1O95672 775 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 GSTP1P09211 210 aaKnown RBP6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 BCRP11274 1271 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 NID1P14543 1247 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 SELPP16109 830 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 GTF2F1P35269 517 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 NASPP49321 788 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 LRRC14Q15048 493 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 MSL1Q68DK7 614 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 MPRIPQ6WCQ1 1025 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 WFDC8Q8IUA0 241 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 SLITRK4Q8IW52 837 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 EMILIN2Q9BXX0 1053 aa6.73□□□□□ -1.33
HMGB1P5-201ENST00000255320 FSCN2O14926 492 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 CILPO75339 1184 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 CTSBP07858 339 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 CELA2BP08218 269 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 GMPRP36959 345 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 DGKGP49619 791 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 GSTM4Q03013 218 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 PTPN11Q06124 597 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 C19orf57Q0VDD7 668 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 COL9A2Q14055 689 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 MPP2Q14168 576 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 SCARA3Q6AZY7 606 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 LYPD4Q6UWN0 246 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 WHAMMQ8TF30 809 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 CARD10Q9BWT7 1032 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 CBX8Q9HC52 389 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 OSGEPQ9NPF4 335 aa6.72□□□□□ -1.33
HMGB1P5-201ENST00000255320 ROBO2Q9HCK4 1378 aa6.71□□□□□ -1.33
HMGB1P5-201ENST00000255320 TLR3O15455 904 aaKnown RBP6.71□□□□□ -1.34
HMGB1P5-201ENST00000255320 TRIM37O94972 964 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms