RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
SAFB2-201ENST00000252542 PTPN21Q16825 1174 aa17.54■□□□□ 0.4
SAFB2-201ENST00000252542 ERICH2A1L162 156 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 CIAO1O76071 339 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 CHRNDQ07001 517 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
SAFB2-201ENST00000252542 SLC12A7Q9Y666 1083 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 PFKFB2O60825 505 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 ZFYP08048 801 aaPredicted RBP17.53■□□□□ 0.4
SAFB2-201ENST00000252542 HMGN5P82970 282 aaKnown RBP17.53■□□□□ 0.4
SAFB2-201ENST00000252542 LPIN2Q92539 896 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 ZNF396Q96N95 335 aaPredicted RBP17.53■□□□□ 0.4
SAFB2-201ENST00000252542 KCNJ14Q9UNX9 436 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 CLIC4Q9Y696 253 aa17.53■□□□□ 0.4
SAFB2-201ENST00000252542 CACNA1FO60840 1977 aa17.52■□□□□ 0.4
SAFB2-201ENST00000252542 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
SAFB2-201ENST00000252542 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
SAFB2-201ENST00000252542 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.4
SAFB2-201ENST00000252542 SLC51AQ86UW1 340 aa17.52■□□□□ 0.4
SAFB2-201ENST00000252542 A0A0U1RQG5 324 aaPredicted RBP17.52■□□□□ 0.39
SAFB2-201ENST00000252542 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.39
SAFB2-201ENST00000252542 ZPR1O75312 459 aa17.52■□□□□ 0.39
SAFB2-201ENST00000252542 LETM1O95202 739 aaPredicted RBP17.52■□□□□ 0.39
SAFB2-201ENST00000252542 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.39
SAFB2-201ENST00000252542 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.39
SAFB2-201ENST00000252542 ANKRD18AQ8IVF6 992 aa17.52■□□□□ 0.39
SAFB2-201ENST00000252542 LCORLQ8N3X6 602 aa17.52■□□□□ 0.39
SAFB2-201ENST00000252542 ADD2P35612 726 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 NOLC1Q14978 699 aaKnown RBP eCLIP17.51■□□□□ 0.39
SAFB2-201ENST00000252542 ANKIB1Q9P2G1 1089 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 ZBTB43O43298 467 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 IGSF3O75054 1194 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 PTGS1P23219 599 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 C3orf67Q6ZVT6 689 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 NRBP1Q9UHY1 535 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 TERF1P54274 439 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 DYNLL1P63167 89 aaKnown RBP17.51■□□□□ 0.39
SAFB2-201ENST00000252542 RESTQ13127 1097 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
SAFB2-201ENST00000252542 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
SAFB2-201ENST00000252542 NACAP1Q9BZK3 213 aa17.5■□□□□ 0.39
SAFB2-201ENST00000252542 CBX8Q9HC52 389 aa17.5■□□□□ 0.39
SAFB2-201ENST00000252542 GPR108Q9NPR9 543 aa17.5■□□□□ 0.39
SAFB2-201ENST00000252542 RAD21O60216 631 aa17.5■□□□□ 0.39
SAFB2-201ENST00000252542 CSF1RP07333 972 aa17.5■□□□□ 0.39
SAFB2-201ENST00000252542 AKAP17AQ02040 695 aaKnown RBP17.5■□□□□ 0.39
SAFB2-201ENST00000252542 TTF1Q15361 905 aaPredicted RBP17.5■□□□□ 0.39
SAFB2-201ENST00000252542 CCDC186Q7Z3E2 898 aa17.5■□□□□ 0.39
SAFB2-201ENST00000252542 LRMPQ12912 555 aa17.49■□□□□ 0.39
SAFB2-201ENST00000252542 IFNL3Q8IZI9 196 aa17.49■□□□□ 0.39
SAFB2-201ENST00000252542 BAZ2BQ9UIF8 2168 aaKnown RBP17.49■□□□□ 0.39
SAFB2-201ENST00000252542 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
SAFB2-201ENST00000252542 KCNB2Q92953 911 aa17.49■□□□□ 0.39
SAFB2-201ENST00000252542 AP5Z1O43299 807 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 SMC2O95347 1197 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 ANTXR2P58335 489 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
SAFB2-201ENST00000252542 MTERF4Q7Z6M4 381 aaKnown RBP17.48■□□□□ 0.39
SAFB2-201ENST00000252542 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
SAFB2-201ENST00000252542 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 ANGEL1Q9UNK9 670 aaKnown RBP17.48■□□□□ 0.39
SAFB2-201ENST00000252542 ZNF652Q9Y2D9 606 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 NEDD4P46934 1319 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 UQCRFS1P1P0C7P4 283 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 EXOSC10Q01780 885 aaKnown RBP17.48■□□□□ 0.39
SAFB2-201ENST00000252542 CAVIN4Q5BKX8 364 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 CLIC6Q96NY7 704 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 SETDB2Q96T68 719 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 AATFQ9NY61 560 aaKnown RBP eCLIP17.48■□□□□ 0.39
SAFB2-201ENST00000252542 FDPSP14324 419 aaKnown RBP17.48■□□□□ 0.39
SAFB2-201ENST00000252542 KLRK1P26718 216 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 PPP4R3BQ5MIZ7 849 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 FAM200AQ8TCP9 573 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 GOLPH3LQ9H4A5 285 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 MRVI1Q9Y6F6 885 aa17.48■□□□□ 0.39
SAFB2-201ENST00000252542 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
SAFB2-201ENST00000252542 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
SAFB2-201ENST00000252542 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
SAFB2-201ENST00000252542 CDC27P30260 824 aa17.47■□□□□ 0.39
SAFB2-201ENST00000252542 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
SAFB2-201ENST00000252542 DDX19AQ9NUU7 478 aaKnown RBP17.47■□□□□ 0.39
SAFB2-201ENST00000252542 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
SAFB2-201ENST00000252542 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
SAFB2-201ENST00000252542 PCDHA7Q9UN72 937 aa17.46■□□□□ 0.39
SAFB2-201ENST00000252542 DCCP43146 1447 aa17.46■□□□□ 0.39
SAFB2-201ENST00000252542 TRIM28Q13263 835 aaKnown RBP17.46■□□□□ 0.39
SAFB2-201ENST00000252542 SART3Q15020 963 aaKnown RBP17.46■□□□□ 0.39
SAFB2-201ENST00000252542 FAM47AQ5JRC9 791 aa17.46■□□□□ 0.39
SAFB2-201ENST00000252542 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.39
SAFB2-201ENST00000252542 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
SAFB2-201ENST00000252542 GNL3LQ9NVN8 582 aaKnown RBP17.46■□□□□ 0.39
SAFB2-201ENST00000252542 WTAPQ15007 396 aa17.45■□□□□ 0.38
SAFB2-201ENST00000252542 C11orf57Q6ZUT1 292 aaPredicted RBP17.45■□□□□ 0.38
SAFB2-201ENST00000252542 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
SAFB2-201ENST00000252542 KIF28PB7ZC32 967 aa17.45■□□□□ 0.38
SAFB2-201ENST00000252542 SPTLC2O15270 562 aa17.45■□□□□ 0.38
SAFB2-201ENST00000252542 FOXP2O15409 715 aa17.45■□□□□ 0.38
SAFB2-201ENST00000252542 NDUFA8P51970 172 aa17.45■□□□□ 0.38
SAFB2-201ENST00000252542 TSGA10IPQ3SY00 556 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms