RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 TRDNQ13061 729 aa20.32■□□□□ 0.84
LRFN3-201ENST00000246529 SNW1Q13573 536 aaKnown RBP20.32■□□□□ 0.84
LRFN3-201ENST00000246529 MAGEB6Q8N7X4 407 aa20.32■□□□□ 0.84
LRFN3-201ENST00000246529 MYO5AQ9Y4I1 1855 aaKnown RBP20.32■□□□□ 0.84
LRFN3-201ENST00000246529 CAMTA2O94983 1202 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 AIDAQ96BJ3 306 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 STRBPQ96SI9 672 aaKnown RBP20.31■□□□□ 0.84
LRFN3-201ENST00000246529 CLIC4Q9Y696 253 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 ATRNO75882 1429 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 NEDD4P46934 1319 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 PLCH1Q4KWH8 1693 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 ERCC4Q92889 916 aaPredicted RBP20.31■□□□□ 0.84
LRFN3-201ENST00000246529 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 KCNF1Q9H3M0 494 aa20.31■□□□□ 0.84
LRFN3-201ENST00000246529 SLC5A1P13866 664 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 ZNF165P49910 485 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 CCDC144CPQ8IYA2 1237 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 FSIP1Q8NA03 581 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 MYH7P12883 1935 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 NUTM2BA6NNL0 878 aaPredicted RBP20.3■□□□□ 0.84
LRFN3-201ENST00000246529 NUTM2EB1AL46 878 aaPredicted RBP20.3■□□□□ 0.84
LRFN3-201ENST00000246529 KIF28PB7ZC32 967 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 TPM2P07951 284 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 BCAMP50895 628 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 NUTM2AQ8IVF1 878 aaPredicted RBP20.3■□□□□ 0.84
LRFN3-201ENST00000246529 ARMT1Q9H993 441 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 EPB41L4AQ9HCS5 686 aaPredicted RBP20.3■□□□□ 0.84
LRFN3-201ENST00000246529 PCDHA7Q9UN72 937 aa20.3■□□□□ 0.84
LRFN3-201ENST00000246529 NIP7Q9Y221 180 aaKnown RBP eCLIP20.3■□□□□ 0.84
LRFN3-201ENST00000246529 DHX16O60231 1041 aaKnown RBP20.29■□□□□ 0.84
LRFN3-201ENST00000246529 MBD4O95243 580 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 ANGEL1Q9UNK9 670 aaKnown RBP20.29■□□□□ 0.84
LRFN3-201ENST00000246529 LRP5O75197 1615 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 CTDSPL2Q05D32 466 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 CCDC73Q6ZRK6 1079 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 C11orf57Q6ZUT1 292 aaPredicted RBP20.29■□□□□ 0.84
LRFN3-201ENST00000246529 ENGASEQ8NFI3 743 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 PIBF1Q8WXW3 757 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 TACC3Q9Y6A5 838 aa20.29■□□□□ 0.84
LRFN3-201ENST00000246529 SH2B2O14492 632 aaPredicted RBP20.28■□□□□ 0.84
LRFN3-201ENST00000246529 KCNQ2O43526 872 aa20.28■□□□□ 0.84
LRFN3-201ENST00000246529 CHMP4CQ96CF2 233 aa20.28■□□□□ 0.84
LRFN3-201ENST00000246529 MYL10Q9BUA6 226 aa20.28■□□□□ 0.84
LRFN3-201ENST00000246529 PRKAB2O43741 272 aa20.28■□□□□ 0.84
LRFN3-201ENST00000246529 A0A1B0GVL5 298 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 NTSR2O95665 410 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 CDC27P30260 824 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
LRFN3-201ENST00000246529 ATL3Q6DD88 541 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 MICU3Q86XE3 530 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 RTEL1Q9NZ71 1219 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 PYCARDQ9ULZ3 195 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 IQSEC3Q9UPP2 1182 aaPredicted RBP20.27■□□□□ 0.84
LRFN3-201ENST00000246529 WDR19Q8NEZ3 1342 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 MYH15Q9Y2K3 1946 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 METAP2P50579 478 aaKnown RBP eCLIP20.27■□□□□ 0.84
LRFN3-201ENST00000246529 KCNQ4P56696 695 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 PHKBQ93100 1093 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 FBXW7Q969H0 707 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 AK7Q96M32 723 aa20.27■□□□□ 0.84
LRFN3-201ENST00000246529 WTIPA6NIX2 430 aaPredicted RBP20.26■□□□□ 0.83
LRFN3-201ENST00000246529 FAM160A1Q05DH4 1040 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 MAP3K12Q12852 859 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 IFNL3Q8IZI9 196 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 LINC00301Q8NCQ3 95 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 TDRD7Q8NHU6 1098 aaKnown RBP20.26■□□□□ 0.83
LRFN3-201ENST00000246529 UBE2Q2LH0YL09 131 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 KINO60870 393 aaKnown RBP20.26■□□□□ 0.83
LRFN3-201ENST00000246529 PTGS1P23219 599 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 APOA5Q6Q788 366 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 SMIM5Q71RC9 77 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 COL22A1Q8NFW1 1626 aaPredicted RBP20.26■□□□□ 0.83
LRFN3-201ENST00000246529 ZMYM6O95789 1325 aa20.26■□□□□ 0.83
LRFN3-201ENST00000246529 PATL2C9JE40 543 aaKnown RBP20.25■□□□□ 0.83
LRFN3-201ENST00000246529 STK38Q15208 465 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
LRFN3-201ENST00000246529 MYSM1Q5VVJ2 828 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 IGDCC4Q8TDY8 1250 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 CDCA7Q9BWT1 371 aaPredicted RBP20.25■□□□□ 0.83
LRFN3-201ENST00000246529 TRIM5Q9C035 493 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 NAPBQ9H115 298 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 NRBP1Q9UHY1 535 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 WNK3Q9BYP7 1800 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
LRFN3-201ENST00000246529 NDUFA8P51970 172 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 KIF23Q02241 960 aaPredicted RBP20.25■□□□□ 0.83
LRFN3-201ENST00000246529 SF3A1Q15459 793 aaKnown RBP20.25■□□□□ 0.83
LRFN3-201ENST00000246529 NFXL1Q6ZNB6 911 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 LCORLQ8N3X6 602 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 MIGA1Q8NAN2 632 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 COL4A1P02462 1669 aa20.25■□□□□ 0.83
LRFN3-201ENST00000246529 AHDC1Q5TGY3 1603 aaPredicted RBP20.25■□□□□ 0.83
LRFN3-201ENST00000246529 CHRNDQ07001 517 aa20.24■□□□□ 0.83
LRFN3-201ENST00000246529 UBE2Q2Q8WVN8 375 aa20.24■□□□□ 0.83
LRFN3-201ENST00000246529 MRPS27Q92552 414 aaKnown RBP20.24■□□□□ 0.83
LRFN3-201ENST00000246529 ALG1Q9BT22 464 aa20.24■□□□□ 0.83
LRFN3-201ENST00000246529 UQCRHLA0A096LP55 91 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms