RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 BCAMP50895 628 aa21.3■■□□□ 1
HOXC6-201ENST00000243108 MFSD14BQ5SR56 506 aa21.3■■□□□ 1
HOXC6-201ENST00000243108 PRMT6Q96LA8 375 aaPredicted RBP21.3■■□□□ 1
HOXC6-201ENST00000243108 HMMRO75330 724 aa21.29■■□□□ 1
HOXC6-201ENST00000243108 DLGAP5Q15398 846 aa21.29■■□□□ 1
HOXC6-201ENST00000243108 CFAP100Q494V2 611 aa21.29■■□□□ 1
HOXC6-201ENST00000243108 SIL1Q9H173 461 aa21.29■■□□□ 1
HOXC6-201ENST00000243108 PA2G4Q9UQ80 394 aaKnown RBP21.29■■□□□ 1
HOXC6-201ENST00000243108 TNS4Q8IZW8 715 aa21.29■■□□□ 1
HOXC6-201ENST00000243108 PRDM10Q9NQV6 1147 aa21.29■■□□□ 1
HOXC6-201ENST00000243108 SPDYE2BA6NHP3 402 aa21.28■■□□□ 1
HOXC6-201ENST00000243108 SPDYE6P0CI01 402 aa21.28■■□□□ 1
HOXC6-201ENST00000243108 ZNF157P51786 506 aaPredicted RBP21.28■■□□□ 1
HOXC6-201ENST00000243108 PUM3Q15397 648 aaKnown RBP21.28■■□□□ 1
HOXC6-201ENST00000243108 TSKSQ9UJT2 592 aa21.28■■□□□ 1
HOXC6-201ENST00000243108 MYH13Q9UKX3 1938 aa21.28■■□□□ 1
HOXC6-201ENST00000243108 NOGQ13253 232 aa21.27■■□□□ 1
HOXC6-201ENST00000243108 VPS37DQ86XT2 251 aa21.26■□□□□ 0.99
HOXC6-201ENST00000243108 APOBEC3FQ8IUX4 373 aaKnown RBP21.26■□□□□ 0.99
HOXC6-201ENST00000243108 TTF2Q9UNY4 1162 aaKnown RBP21.26■□□□□ 0.99
HOXC6-201ENST00000243108 CLRN2A0PK11 232 aa21.26■□□□□ 0.99
HOXC6-201ENST00000243108 UBE2Q2LH0YL09 131 aa21.26■□□□□ 0.99
HOXC6-201ENST00000243108 CHAF1AQ13111 956 aaPredicted RBP21.26■□□□□ 0.99
HOXC6-201ENST00000243108 CAVIN4Q5BKX8 364 aa21.26■□□□□ 0.99
HOXC6-201ENST00000243108 CIAO1O76071 339 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 SEC24BO95487 1268 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 SLC10A3P09131 477 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 FKBP1BP68106 108 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 BMP2KLQ5H9B9 411 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 DEFB129Q9H1M3 183 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 FZD1Q9UP38 647 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 SSC5DA1L4H1 1573 aa21.25■□□□□ 0.99
HOXC6-201ENST00000243108 COL1A1P02452 1464 aaPredicted RBP21.24■□□□□ 0.99
HOXC6-201ENST00000243108 ATP8B2P98198 1209 aa21.24■□□□□ 0.99
HOXC6-201ENST00000243108 RASAL3Q86YV0 1011 aa21.24■□□□□ 0.99
HOXC6-201ENST00000243108 CCDC102AQ96A19 550 aa21.24■□□□□ 0.99
HOXC6-201ENST00000243108 COPRSQ9NQ92 184 aa21.24■□□□□ 0.99
HOXC6-201ENST00000243108 FBXO3Q9UK99 471 aa21.24■□□□□ 0.99
HOXC6-201ENST00000243108 IFIT1P09914 478 aaKnown RBP21.24■□□□□ 0.99
HOXC6-201ENST00000243108 KIF23Q02241 960 aaPredicted RBP21.24■□□□□ 0.99
HOXC6-201ENST00000243108 LPIN2Q92539 896 aa21.24■□□□□ 0.99
HOXC6-201ENST00000243108 RBM5P52756 815 aaKnown RBP eCLIP21.23■□□□□ 0.99
HOXC6-201ENST00000243108 BEGAINQ9BUH8 593 aa21.23■□□□□ 0.99
HOXC6-201ENST00000243108 SERPINA10Q9UK55 444 aa21.23■□□□□ 0.99
HOXC6-201ENST00000243108 CASP8AP2Q9UKL3 1982 aa21.22■□□□□ 0.99
HOXC6-201ENST00000243108 MTX1Q13505 466 aa21.22■□□□□ 0.99
HOXC6-201ENST00000243108 PRKG1Q13976 671 aa21.22■□□□□ 0.99
HOXC6-201ENST00000243108 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
HOXC6-201ENST00000243108 HDAC5Q9UQL6 1122 aa21.22■□□□□ 0.99
HOXC6-201ENST00000243108 NOP58Q9Y2X3 529 aaKnown RBP21.22■□□□□ 0.99
HOXC6-201ENST00000243108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.22■□□□□ 0.99
HOXC6-201ENST00000243108 SRGAP3O43295 1099 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 FRAT2O75474 233 aaPredicted RBP21.21■□□□□ 0.99
HOXC6-201ENST00000243108 SLC5A1P13866 664 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 CRKP46108 304 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 ATP2B3Q16720 1220 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 TDRD3Q9H7E2 651 aaKnown RBP21.21■□□□□ 0.99
HOXC6-201ENST00000243108 VEZTQ9HBM0 779 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 CEP126Q9P2H0 1117 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 AKAP11Q9UKA4 1901 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 IL15P40933 162 aaPredicted RBP21.21■□□□□ 0.99
HOXC6-201ENST00000243108 SPDYE2Q495Y8 402 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 CSRNP1Q96S65 589 aa21.21■□□□□ 0.99
HOXC6-201ENST00000243108 PNMA6EA0A0J9YXQ4 647 aa21.2■□□□□ 0.98
HOXC6-201ENST00000243108 TTLL12Q14166 644 aaPredicted RBP21.2■□□□□ 0.98
HOXC6-201ENST00000243108 PLEKHM2Q8IWE5 1019 aa21.2■□□□□ 0.98
HOXC6-201ENST00000243108 ZNF70Q9UC06 446 aaPredicted RBP21.2■□□□□ 0.98
HOXC6-201ENST00000243108 MYO1BO43795 1136 aa21.19■□□□□ 0.98
HOXC6-201ENST00000243108 ADORA1P30542 326 aa21.19■□□□□ 0.98
HOXC6-201ENST00000243108 NF2P35240 595 aa21.19■□□□□ 0.98
HOXC6-201ENST00000243108 TBC1D22AQ8WUA7 517 aa21.19■□□□□ 0.98
HOXC6-201ENST00000243108 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
HOXC6-201ENST00000243108 RASA3Q14644 834 aa21.18■□□□□ 0.98
HOXC6-201ENST00000243108 NBPF12Q5TAG4 269 aaPredicted RBP21.18■□□□□ 0.98
HOXC6-201ENST00000243108 CDAN1Q8IWY9 1227 aa21.18■□□□□ 0.98
HOXC6-201ENST00000243108 SSH3Q8TE77 659 aa21.18■□□□□ 0.98
HOXC6-201ENST00000243108 PHKA1P46020 1223 aa21.18■□□□□ 0.98
HOXC6-201ENST00000243108 LDLRAD1Q5T700 205 aa21.18■□□□□ 0.98
HOXC6-201ENST00000243108 CA12O43570 354 aa21.17■□□□□ 0.98
HOXC6-201ENST00000243108 CAPN15O75808 1086 aa21.17■□□□□ 0.98
HOXC6-201ENST00000243108 TIMM10P62072 90 aa21.17■□□□□ 0.98
HOXC6-201ENST00000243108 POLA2Q14181 598 aa21.17■□□□□ 0.98
HOXC6-201ENST00000243108 UPF2Q9HAU5 1272 aaKnown RBP21.17■□□□□ 0.98
HOXC6-201ENST00000243108 ANGEL1Q9UNK9 670 aaKnown RBP21.17■□□□□ 0.98
HOXC6-201ENST00000243108 PPP2R3BQ9Y5P8 575 aa21.17■□□□□ 0.98
HOXC6-201ENST00000243108 HDLBPQ00341 1268 aaKnown RBP21.16■□□□□ 0.98
HOXC6-201ENST00000243108 TFCP2Q12800 502 aa21.16■□□□□ 0.98
HOXC6-201ENST00000243108 TEPSINQ96N21 525 aa21.16■□□□□ 0.98
HOXC6-201ENST00000243108 ARMC9Q7Z3E5 817 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 TBC1D32Q96NH3 1257 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 RNF186Q9NXI6 227 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 OTOFQ9HC10 1997 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 TCP10L2B9ZVM9 353 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 CACNB3P54284 484 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 MKRN3Q13064 507 aaKnown RBP21.15■□□□□ 0.98
HOXC6-201ENST00000243108 MAP3K11Q16584 847 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 APOBEC3HQ6NTF7 200 aaKnown RBP21.15■□□□□ 0.98
HOXC6-201ENST00000243108 TEKT1Q969V4 418 aa21.15■□□□□ 0.98
HOXC6-201ENST00000243108 SMARCA5O60264 1052 aaPredicted RBP21.14■□□□□ 0.97
HOXC6-201ENST00000243108 TRPA1O75762 1119 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms