RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 STARD3NLO95772 234 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 CDC27P30260 824 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 SYNE3Q6ZMZ3 975 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 FMR1NBQ8N0W7 255 aaPredicted RBP19.62■□□□□ 0.73
SSPN-201ENST00000242729 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 GOLGB1Q14789 3259 aaKnown RBP19.62■□□□□ 0.73
SSPN-201ENST00000242729 TJP1Q07157 1748 aa19.62■□□□□ 0.73
SSPN-201ENST00000242729 CBX1P83916 185 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 TRDNQ13061 729 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 GNL2Q13823 731 aaKnown RBP19.61■□□□□ 0.73
SSPN-201ENST00000242729 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.61■□□□□ 0.73
SSPN-201ENST00000242729 V9GYY5 206 aaPredicted RBP19.61■□□□□ 0.73
SSPN-201ENST00000242729 ANKRD18BA2A2Z9 1011 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 SPTLC2O15270 562 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
SSPN-201ENST00000242729 ZRSR1Q15695 479 aaKnown RBP19.61■□□□□ 0.73
SSPN-201ENST00000242729 MYSM1Q5VVJ2 828 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 CCDC102BQ68D86 513 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 LMTK3Q96Q04 1460 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 CTSWP56202 376 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 GIGYF2Q6Y7W6 1299 aaKnown RBP19.61■□□□□ 0.73
SSPN-201ENST00000242729 CLIC6Q96NY7 704 aa19.61■□□□□ 0.73
SSPN-201ENST00000242729 PKD1L3Q7Z443 1732 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 PRKAB2O43741 272 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 WDHD1O75717 1129 aaPredicted RBP19.6■□□□□ 0.73
SSPN-201ENST00000242729 SMC2O95347 1197 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 CSF1RP07333 972 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 SEC31BQ9NQW1 1179 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 NEDD4P46934 1319 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 MAP3K15Q6ZN16 1313 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 TPM3P06753 285 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 ALG1Q9BT22 464 aa19.6■□□□□ 0.73
SSPN-201ENST00000242729 WTIPA6NIX2 430 aaPredicted RBP19.59■□□□□ 0.73
SSPN-201ENST00000242729 SKILP12757 684 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 ATP2B1P20020 1258 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 METAP2P50579 478 aaKnown RBP eCLIP19.59■□□□□ 0.73
SSPN-201ENST00000242729 LRRC8AQ8IWT6 810 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 ANO10Q9NW15 660 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 RIC1Q4ADV7 1423 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 SMIM22K7EJ46 135 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 ZFYP08048 801 aaPredicted RBP19.59■□□□□ 0.73
SSPN-201ENST00000242729 ADD2P35612 726 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 CEP57L1Q8IYX8 460 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 MAGEB6Q8N7X4 407 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 MIGA1Q8NAN2 632 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.59■□□□□ 0.73
SSPN-201ENST00000242729 RTEL1Q9NZ71 1219 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 MROH7-TTC4A0A0A0MT08 1334 aa19.59■□□□□ 0.73
SSPN-201ENST00000242729 CCDC69A6NI79 296 aa19.58■□□□□ 0.73
SSPN-201ENST00000242729 PDE6AP16499 860 aa19.58■□□□□ 0.73
SSPN-201ENST00000242729 ADALQ6DHV7 355 aa19.58■□□□□ 0.73
SSPN-201ENST00000242729 AIDAQ96BJ3 306 aa19.58■□□□□ 0.73
SSPN-201ENST00000242729 NPHP1O15259 732 aa19.58■□□□□ 0.72
SSPN-201ENST00000242729 ZNF202O95125 648 aa19.58■□□□□ 0.72
SSPN-201ENST00000242729 LMOD1P29536 600 aaPredicted RBP19.58■□□□□ 0.72
SSPN-201ENST00000242729 KIF23Q02241 960 aaPredicted RBP19.58■□□□□ 0.72
SSPN-201ENST00000242729 LRRFIP1Q32MZ4 808 aaKnown RBP19.58■□□□□ 0.72
SSPN-201ENST00000242729 ACSBG1Q96GR2 724 aa19.58■□□□□ 0.72
SSPN-201ENST00000242729 PFKFB1P16118 471 aa19.57■□□□□ 0.72
SSPN-201ENST00000242729 ANO1Q5XXA6 986 aa19.57■□□□□ 0.72
SSPN-201ENST00000242729 DZIP3Q86Y13 1208 aaKnown RBP19.57■□□□□ 0.72
SSPN-201ENST00000242729 IFNKQ9P0W0 207 aa19.57■□□□□ 0.72
SSPN-201ENST00000242729 UBN2Q6ZU65 1347 aa19.57■□□□□ 0.72
SSPN-201ENST00000242729 NWD2Q9ULI1 1742 aa19.57■□□□□ 0.72
SSPN-201ENST00000242729 NUP188Q5SRE5 1749 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 CTAGE5O15320 804 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 DHX16O60231 1041 aaKnown RBP19.56■□□□□ 0.72
SSPN-201ENST00000242729 MBD4O95243 580 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 PDE8BO95263 885 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 ANGEL1Q9UNK9 670 aaKnown RBP19.56■□□□□ 0.72
SSPN-201ENST00000242729 TACC3Q9Y6A5 838 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 LAMB4A4D0S4 1761 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 SLC3A2P08195 630 aaKnown RBP19.56■□□□□ 0.72
SSPN-201ENST00000242729 GOLGA8FQ08AF8 430 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 GOLGA8DPQ0D2H9 430 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 KIAA1468Q9P260 1216 aa19.56■□□□□ 0.72
SSPN-201ENST00000242729 U2AF2P26368 475 aaKnown RBP eCLIP19.55■□□□□ 0.72
SSPN-201ENST00000242729 KRT40Q6A162 431 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 SMIM5Q71RC9 77 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 SLC26A6Q9BXS9 759 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 XPO4Q9C0E2 1151 aaKnown RBP19.55■□□□□ 0.72
SSPN-201ENST00000242729 CYP19A1P11511 503 aaPredicted RBP19.55■□□□□ 0.72
SSPN-201ENST00000242729 ATP1A3P13637 1013 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 GUCY1A2P33402 732 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 TMEM67Q5HYA8 995 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.55■□□□□ 0.72
SSPN-201ENST00000242729 BCAMP50895 628 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 PNOCQ13519 176 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 APOA5Q6Q788 366 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 TMC6Q7Z403 805 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 CHMP4CQ96CF2 233 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 KCNJ14Q9UNX9 436 aa19.55■□□□□ 0.72
SSPN-201ENST00000242729 RANBP6O60518 1105 aaKnown RBP19.54■□□□□ 0.72
SSPN-201ENST00000242729 RASGRF1Q13972 1273 aa19.54■□□□□ 0.72
SSPN-201ENST00000242729 MAP7D2Q96T17 732 aa19.54■□□□□ 0.72
SSPN-201ENST00000242729 SOS2Q07890 1332 aaPredicted RBP19.54■□□□□ 0.72
SSPN-201ENST00000242729 hCG_1642624A0A1W2PR95 340 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms