RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 KRT83P78385 493 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 SPOUT1Q5T280 376 aaKnown RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 KIFC2Q96AC6 838 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 PTPDC1A2A3K4 754 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 TRIM6Q9C030 488 aaPredicted RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 DNAJC25Q9H1X3 360 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 PAXBP1Q9Y5B6 917 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 EPB41P11171 864 aaKnown RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 SYT1P21579 422 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 EIF4A2Q14240 407 aaKnown RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 CFAP157Q5JU67 520 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 TTC6Q86TZ1 520 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 FCHSD1Q86WN1 690 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 CCT6BQ92526 530 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 SMC6Q96SB8 1091 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 SLC8A3P57103 927 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 KIF5AQ12840 1032 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 BRDTQ58F21 947 aaPredicted RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 MRPL50Q8N5N7 158 aaKnown RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 GOLGA1Q92805 767 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 CCNL1Q9UK58 526 aaPredicted RBP14.91□□□□□ -0.02
COL1A1-201ENST00000225964 IVNS1ABPQ9Y6Y0 642 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 DDX39AO00148 427 aaKnown RBP14.91□□□□□ -0.02
COL1A1-201ENST00000225964 CAVIN2O95810 425 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 MTHFSDQ2M296 383 aaKnown RBP14.91□□□□□ -0.02
COL1A1-201ENST00000225964 LETM2Q2VYF4 491 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 NAP1L4Q99733 375 aaKnown RBP14.91□□□□□ -0.02
COL1A1-201ENST00000225964 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 RRP9O43818 475 aaKnown RBP14.91□□□□□ -0.02
COL1A1-201ENST00000225964 STRN3Q13033 797 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 PPP1R21Q6ZMI0 780 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 GINS2Q9Y248 185 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 UHRF1BP1LA0JNW5 1464 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 RALGAPBQ86X10 1494 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 CCT6AP40227 531 aaKnown RBP14.91□□□□□ -0.02
COL1A1-201ENST00000225964 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
COL1A1-201ENST00000225964 GABPAQ06546 454 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 C8orf58Q8NAV2 365 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 HSPA4P34932 840 aa14.91□□□□□ -0.02
COL1A1-201ENST00000225964 MAP3K5Q99683 1374 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC160A6NGH7 325 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 E7EVH7 732 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 CCNT1O60563 726 aaKnown RBP14.9□□□□□ -0.02
COL1A1-201ENST00000225964 MBD4O95243 580 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 UAP1Q16222 522 aaPredicted RBP14.9□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC42Q96M95 316 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 CTNND2Q9UQB3 1225 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 DAPK3O43293 454 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 ZNF174Q15697 407 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 SEL1L2Q5TEA6 688 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 SV2BQ7L1I2 683 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 GEN1Q17RS7 908 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 KIFAP3Q92845 792 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 STX10O60499 249 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 KCNK9Q9NPC2 374 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 CALCOCO1Q9P1Z2 691 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 LPXNO60711 386 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 KMT5BQ4FZB7 885 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 IFT74Q96LB3 600 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 ABCC1P33527 1531 aa14.9□□□□□ -0.02
COL1A1-201ENST00000225964 KRT86O43790 486 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 BIRC2Q13490 618 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 TRPC3Q13507 836 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 MAEAQ7L5Y9 396 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 GUCA1BQ9UMX6 200 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 OPA1O60313 960 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 F13A1P00488 732 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 SKILP12757 684 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 KARSQ15046 597 aaKnown RBP14.89□□□□□ -0.03
COL1A1-201ENST00000225964 IFT81Q8WYA0 676 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 ZBTB9Q96C00 473 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 GGA1Q9UJY5 639 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 TEX14Q8IWB6 1497 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 SMTNP53814 917 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 EAPPQ56P03 285 aaPredicted RBP14.89□□□□□ -0.03
COL1A1-201ENST00000225964 NACA2Q9H009 215 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 VWA3AA6NCI4 1184 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 ASXL1Q8IXJ9 1541 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 CREB3L3Q68CJ9 461 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 MSL1Q68DK7 614 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 PPP1R9BQ96SB3 815 aa14.89□□□□□ -0.03
COL1A1-201ENST00000225964 RPL13P26373 211 aaKnown RBP14.88□□□□□ -0.03
COL1A1-201ENST00000225964 PFDN4Q9NQP4 134 aa14.88□□□□□ -0.03
COL1A1-201ENST00000225964 ATRIPQ8WXE1 791 aa14.88□□□□□ -0.03
COL1A1-201ENST00000225964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL1A1-201ENST00000225964 H0YIN7 160 aa14.88□□□□□ -0.03
COL1A1-201ENST00000225964 HSPA2P54652 639 aa14.88□□□□□ -0.03
COL1A1-201ENST00000225964 ANKS4BQ8N8V4 417 aa14.88□□□□□ -0.03
COL1A1-201ENST00000225964 HIBADHP31937 336 aaKnown RBP14.88□□□□□ -0.03
COL1A1-201ENST00000225964 DAAM2Q86T65 1068 aa14.88□□□□□ -0.03
COL1A1-201ENST00000225964 TTC14Q96N46 770 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 ANKRD44Q8N8A2 993 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 DCAF5Q96JK2 942 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 TSGA10Q9BZW7 698 aa14.87□□□□□ -0.03
COL1A1-201ENST00000225964 RNMTO43148 476 aaKnown RBP14.87□□□□□ -0.03
COL1A1-201ENST00000225964 MCM6Q14566 821 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms