RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 APPP05067 770 aa17.64■□□□□ 0.42
CCDC47-201ENST00000225726 CYP7A1P22680 504 aa17.64■□□□□ 0.42
CCDC47-201ENST00000225726 ARMT1Q9H993 441 aa17.64■□□□□ 0.42
CCDC47-201ENST00000225726 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.42
CCDC47-201ENST00000225726 HAND2P61296 217 aa17.64■□□□□ 0.41
CCDC47-201ENST00000225726 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.41
CCDC47-201ENST00000225726 TXNRD3Q86VQ6 643 aa17.64■□□□□ 0.41
CCDC47-201ENST00000225726 BRD1O95696 1058 aa17.64■□□□□ 0.41
CCDC47-201ENST00000225726 MMP10P09238 476 aa17.64■□□□□ 0.41
CCDC47-201ENST00000225726 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
CCDC47-201ENST00000225726 PTMSP20962 102 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 TMED8Q6PL24 325 aaPredicted RBP17.63■□□□□ 0.41
CCDC47-201ENST00000225726 SLC51AQ86UW1 340 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 AGXT2Q9BYV1 514 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 ZNF804AQ7Z570 1209 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 LTBP1Q14766 1721 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 EN1Q05925 392 aaPredicted RBP17.63■□□□□ 0.41
CCDC47-201ENST00000225726 SLC15A2Q16348 729 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 LCORLQ8N3X6 602 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 STK32BQ9NY57 414 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 GGA1Q9UJY5 639 aa17.63■□□□□ 0.41
CCDC47-201ENST00000225726 PDE6BP35913 854 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 IFNL3Q8IZI9 196 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 NECAB1Q8N987 351 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 TIAM2Q8IVF5 1701 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 IGSF3O75054 1194 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 BAG4O95429 457 aaKnown RBP17.62■□□□□ 0.41
CCDC47-201ENST00000225726 NPR1P16066 1061 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 FGD1P98174 961 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 NCOA7Q8NI08 942 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 EPB41L4AQ9HCS5 686 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-201ENST00000225726 COL11A2P13942 1736 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-201ENST00000225726 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 MAGEB6P1A0A0J9YX57 407 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 PPEF1O14829 653 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-201ENST00000225726 UFL1O94874 794 aa17.62■□□□□ 0.41
CCDC47-201ENST00000225726 NAA16Q6N069 864 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-201ENST00000225726 CCDC88AQ3V6T2 1871 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 DUOX1Q9NRD9 1551 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 GSG1L2A8MUP6 293 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 CHAF1AQ13111 956 aaPredicted RBP17.61■□□□□ 0.41
CCDC47-201ENST00000225726 MB21D2Q8IYB1 491 aaPredicted RBP17.61■□□□□ 0.41
CCDC47-201ENST00000225726 TDRD7Q8NHU6 1098 aaKnown RBP17.61■□□□□ 0.41
CCDC47-201ENST00000225726 BRF1Q92994 677 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 NACAP1Q9BZK3 213 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 NAPBQ9H115 298 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 NSFL1CQ9UNZ2 370 aaKnown RBP17.61■□□□□ 0.41
CCDC47-201ENST00000225726 SLC4A4Q9Y6R1 1079 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 WDR19Q8NEZ3 1342 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 SALL1Q9NSC2 1324 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 SRGNP10124 158 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 NBPF3Q9H094 633 aa17.61■□□□□ 0.41
CCDC47-201ENST00000225726 WDR33Q9C0J8 1336 aaKnown RBP17.61■□□□□ 0.41
CCDC47-201ENST00000225726 SPTY2D1Q68D10 685 aaPredicted RBP17.6■□□□□ 0.41
CCDC47-201ENST00000225726 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
CCDC47-201ENST00000225726 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 GOLGA6L22H0YM25 854 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 GJB2P29033 226 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 MSL1Q68DK7 614 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 NSUN4Q96CB9 384 aaKnown RBP17.6■□□□□ 0.41
CCDC47-201ENST00000225726 MCM5P33992 734 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 WDR66Q8TBY9 1149 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 GTF3C6Q969F1 213 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 CHD4Q14839 1912 aa17.6■□□□□ 0.41
CCDC47-201ENST00000225726 TBC1D10CQ8IV04 446 aa17.59■□□□□ 0.41
CCDC47-201ENST00000225726 MECOMQ03112 1051 aa17.59■□□□□ 0.41
CCDC47-201ENST00000225726 TRDNQ13061 729 aa17.59■□□□□ 0.41
CCDC47-201ENST00000225726 ZNF384Q8TF68 577 aa17.59■□□□□ 0.41
CCDC47-201ENST00000225726 RIOK1Q9BRS2 568 aaKnown RBP17.59■□□□□ 0.41
CCDC47-201ENST00000225726 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
CCDC47-201ENST00000225726 PRKAB2O43741 272 aa17.59■□□□□ 0.41
CCDC47-201ENST00000225726 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
CCDC47-201ENST00000225726 PFKFB2O60825 505 aa17.58■□□□□ 0.41
CCDC47-201ENST00000225726 STK3Q13188 491 aa17.58■□□□□ 0.41
CCDC47-201ENST00000225726 TBC1D16Q8TBP0 767 aa17.58■□□□□ 0.41
CCDC47-201ENST00000225726 PRC1O43663 620 aa17.58■□□□□ 0.4
CCDC47-201ENST00000225726 TDO2P48775 406 aa17.58■□□□□ 0.4
CCDC47-201ENST00000225726 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
CCDC47-201ENST00000225726 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
CCDC47-201ENST00000225726 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
CCDC47-201ENST00000225726 PDIA4P13667 645 aaKnown RBP17.57■□□□□ 0.4
CCDC47-201ENST00000225726 BAG6P46379 1132 aa17.57■□□□□ 0.4
CCDC47-201ENST00000225726 APOBRQ0VD83 1088 aa17.57■□□□□ 0.4
CCDC47-201ENST00000225726 ZNF274Q96GC6 653 aaPredicted RBP17.57■□□□□ 0.4
CCDC47-201ENST00000225726 POLLQ9UGP5 575 aa17.57■□□□□ 0.4
CCDC47-201ENST00000225726 STX6O43752 255 aa17.57■□□□□ 0.4
CCDC47-201ENST00000225726 IL1R1P14778 569 aa17.57■□□□□ 0.4
CCDC47-201ENST00000225726 SYT1P21579 422 aa17.57■□□□□ 0.4
CCDC47-201ENST00000225726 CHST3Q7LGC8 479 aa17.57■□□□□ 0.4
CCDC47-201ENST00000225726 PRDX5P30044 214 aa17.56■□□□□ 0.4
CCDC47-201ENST00000225726 EVCP57679 992 aa17.56■□□□□ 0.4
CCDC47-201ENST00000225726 ANTXR2P58335 489 aa17.56■□□□□ 0.4
CCDC47-201ENST00000225726 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
CCDC47-201ENST00000225726 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
CCDC47-201ENST00000225726 CD209Q9NNX6 404 aa17.56■□□□□ 0.4
CCDC47-201ENST00000225726 TRAK2O60296 914 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms