RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 MICALL1Q8N3F8 863 aa15.73■□□□□ 0.11
GABPB1-201ENST00000220429 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
GABPB1-201ENST00000220429 TNS2Q63HR2 1409 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 C21orf2O43822 256 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 USP8P40818 1118 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 AK2P54819 239 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 TFCP2Q12800 502 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 PRPF40BQ6NWY9 871 aaKnown RBP15.72■□□□□ 0.11
GABPB1-201ENST00000220429 KCNB2Q92953 911 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
GABPB1-201ENST00000220429 CPA1P15085 419 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 TNNI3KQ59H18 835 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 CC2D1AQ6P1N0 951 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-201ENST00000220429 ITFG2Q969R8 447 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 MIEF2Q96C03 454 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 FAXDC2Q96IV6 333 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 CBX8Q9HC52 389 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 KCND1Q9NSA2 647 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 FPGT-TNNI3KV9GXZ4 949 aa15.72■□□□□ 0.11
GABPB1-201ENST00000220429 H7C1W4 665 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 HIP1O00291 1037 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 INHBEP58166 350 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 EVA1CP58658 441 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 SNW1Q13573 536 aaKnown RBP15.71■□□□□ 0.11
GABPB1-201ENST00000220429 LMBR1LQ6UX01 489 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 A0A0D9SFI3 127 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 CDC25BP30305 580 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 FOXO4P98177 505 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 TYRO3Q06418 890 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 ARID5BQ14865 1188 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 NECTIN1Q15223 517 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 ADCK5Q3MIX3 580 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 RUFY3Q7L099 469 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 FSD1Q9BTV5 496 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 SNRKQ9NRH2 765 aa15.71■□□□□ 0.11
GABPB1-201ENST00000220429 CCDC158Q5M9N0 1113 aa15.7■□□□□ 0.1
GABPB1-201ENST00000220429 GIMAP7Q8NHV1 300 aa15.7■□□□□ 0.1
GABPB1-201ENST00000220429 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
GABPB1-201ENST00000220429 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
GABPB1-201ENST00000220429 FIBPO43427 364 aa15.7■□□□□ 0.1
GABPB1-201ENST00000220429 MAP4K1Q92918 833 aa15.7■□□□□ 0.1
GABPB1-201ENST00000220429 EDC3Q96F86 508 aaKnown RBP15.7■□□□□ 0.1
GABPB1-201ENST00000220429 CWC25Q9NXE8 425 aaPredicted RBP15.7■□□□□ 0.1
GABPB1-201ENST00000220429 RBM8AQ9Y5S9 174 aaKnown RBP15.7■□□□□ 0.1
GABPB1-201ENST00000220429 HNRNPH1P31943 449 aaKnown RBP15.69■□□□□ 0.1
GABPB1-201ENST00000220429 NAIF1Q69YI7 327 aaPredicted RBP15.69■□□□□ 0.1
GABPB1-201ENST00000220429 TTC19Q6DKK2 380 aaPredicted RBP15.69■□□□□ 0.1
GABPB1-201ENST00000220429 JAKMIP1Q96N16 626 aaKnown RBP15.69■□□□□ 0.1
GABPB1-201ENST00000220429 ZBTB3Q9H5J0 574 aa15.69■□□□□ 0.1
GABPB1-201ENST00000220429 MED23Q9ULK4 1368 aa15.69■□□□□ 0.1
GABPB1-201ENST00000220429 H3BQF6 201 aa15.69■□□□□ 0.1
GABPB1-201ENST00000220429 ATP5JP18859 108 aa15.69■□□□□ 0.1
GABPB1-201ENST00000220429 LIMCH1Q9UPQ0 1083 aa15.69■□□□□ 0.1
GABPB1-201ENST00000220429 NEBLO76041 1014 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 MAP3K11Q16584 847 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
GABPB1-201ENST00000220429 STAG1Q8WVM7 1258 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 TM6SF1Q9BZW5 370 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 ZSWIM6Q9HCJ5 1215 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 KAT6BQ8WYB5 2073 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 IRX1P78414 480 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-201ENST00000220429 CCZ1BP86790 482 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 CCZ1P86791 482 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-201ENST00000220429 ANO6Q4KMQ2 910 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 CREB3L3Q68CJ9 461 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 GBP6Q6ZN66 633 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 OTUD6BQ8N6M0 293 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 KAT2BQ92831 832 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 ARFGAP3Q9NP61 516 aa15.68■□□□□ 0.1
GABPB1-201ENST00000220429 GNL3LQ9NVN8 582 aaKnown RBP15.68■□□□□ 0.1
GABPB1-201ENST00000220429 ERLIN2O94905 339 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 LARGE1O95461 756 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 GORABQ5T7V8 394 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 FUT8Q9BYC5 575 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 VPS18Q9P253 973 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 ITGB4P16144 1822 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 CCDC69A6NI79 296 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 ZNF589Q86UQ0 364 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-201ENST00000220429 NDUFB9Q9Y6M9 179 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 ERCC3P19447 782 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 EIF5P55010 431 aaKnown RBP15.67■□□□□ 0.1
GABPB1-201ENST00000220429 VPS53Q5VIR6 699 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 TMOD3Q9NYL9 352 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 CYP46A1Q9Y6A2 500 aa15.67■□□□□ 0.1
GABPB1-201ENST00000220429 EFCAB8A8MWE9 144 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 TADA3O75528 432 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
GABPB1-201ENST00000220429 ATG9AQ7Z3C6 839 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 SLC24A3Q9HC58 644 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 JCADQ9P266 1359 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 ANKRD33BA6NCL7 494 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 SLC27A2O14975 620 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 ZKSCAN1P17029 563 aaPredicted RBP15.66■□□□□ 0.1
GABPB1-201ENST00000220429 ZC3H12AQ5D1E8 599 aaKnown RBP15.66■□□□□ 0.1
GABPB1-201ENST00000220429 LRRC31Q6UY01 552 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 FAM107BQ9H098 131 aa15.66■□□□□ 0.1
GABPB1-201ENST00000220429 COL9A3Q14050 684 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-201ENST00000220429 KCNV1Q6PIU1 500 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms