RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Dpf1Q9QX66 387 aa17.07■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Izumo3A6PWV3 263 aa17.07■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Lnx1O70263 728 aa17.07■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Mcm3P25206 812 aaKnown RBP17.07■□□□□ 0.32
Rnf4-207ENSMUST00000182709 ImmtQ8CAQ8 757 aaKnown RBP17.07■□□□□ 0.32
Rnf4-207ENSMUST00000182709 RarsQ9D0I9 660 aaKnown RBP17.07■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Arap2Q8BZ05 1703 aa17.07■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Map3k15A2AQW0 1331 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Stat5bP42232 786 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Mxd3Q80US8 206 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Nhsl1Q8CAF4 1587 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Nap1l3Q794H2 544 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Zfp113Q8C689 439 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ric1Q69ZJ7 1422 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Kndc1Q0KK55 1742 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Zfyve9A2A8R0 1397 aa17.06■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Slc7a3P70423 618 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Znf326O88291 580 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Me1P06801 572 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Rhbdl3P58873 404 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Bach1P97302 739 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Limch1Q3UH68 1057 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Leo1Q5XJE5 667 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Polr3gQ6NXY9 223 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Atxn2lQ7TQH0 1049 aaKnown RBP17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 EvplQ9D952 2035 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Prl7d1P04769 244 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Pald1P70261 859 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Mindy4Q3UQI9 744 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ppp6r1Q7TSI3 856 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Odf2lQ9D478 642 aa17.05■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Tmem59lQ7TNI2 337 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ttc12Q8BW49 704 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Greb1lB9EJV3 1913 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Olfm5Q8BU90 496 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 9230110C19RikQ8CC70 267 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Gripap1Q8VD04 806 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Uba5Q8VE47 403 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ccdc39Q9D5Y1 937 aa17.04■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ubn2Q80WC1 1314 aa17.03■□□□□ 0.32
Rnf4-207ENSMUST00000182709 U2af1l4Q8BGJ9 220 aa17.03■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ccdc178Q8CDV0 866 aa17.03■□□□□ 0.32
Rnf4-207ENSMUST00000182709 BrapQ99MP8 591 aa17.03■□□□□ 0.32
Rnf4-207ENSMUST00000182709 NcapgE9PWG6 1004 aa17.03■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Casc1Q6TDU8 730 aa17.03■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Bnip3O55003 187 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Kif4P33174 1231 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Jdp2P97875 163 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Wdr93Q402B2 695 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 HelbQ6NVF4 1074 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ccdc82Q6PG04 518 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ncaph2Q8BSP2 607 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Ndufa8Q9DCJ5 172 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Znfx1Q8R151 1909 aaKnown RBP17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Il15P48346 162 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Nme8Q715T0 586 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Abca3Q8R420 1704 aa17.02■□□□□ 0.32
Rnf4-207ENSMUST00000182709 Tuft1O08970 390 aa17.02■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Esyt1Q3U7R1 1092 aaKnown RBP17.02■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Fam198bQ3UPI1 517 aa17.02■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Adam1bQ8R534 806 aa17.02■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Suclg2Q9Z2I8 433 aa17.02■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Sh3tc1G3X9F6 1346 aa17.01■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Lmod3E9QA62 571 aa17.01■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Cyp26a1O55127 497 aa17.01■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Myl3P09542 204 aa17.01■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Lonrf3Q9D4H7 753 aa17.01■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Dennd3A2RT67 1274 aa17.01■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Alx1Q8C8B0 326 aa17.01■□□□□ 0.31
Rnf4-207ENSMUST00000182709 MeiocA2AG06 965 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Ces1hD3Z298 562 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Spata5Q3UMC0 893 aaKnown RBP17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Mrpl44Q9CY73 333 aaKnown RBP17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Dydc2Q9D3X8 139 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Wdr78E9PYY5 807 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Vars2Q3U2A8 1060 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Larp6Q8BN59 492 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Zfp317Q8C0Q5 607 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Fam13bQ8K2H3 851 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Terf2ipQ91VL8 393 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Krt84Q99M73 603 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Fbxo3Q9DC63 480 aa17■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Cyp3a59D3Z2W7 503 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Kdm4aQ8BW72 1064 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Rps6ka5Q8C050 863 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 MsnP26041 577 aaKnown RBP16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Pde6aP27664 859 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Mrps25Q9D125 171 aaKnown RBP16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Carmil3Q3UFQ8 1375 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Kifc2O08672 792 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Wdr24Q8CFJ9 790 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Chd1lQ9CXF7 900 aa16.99■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Metap2O08663 478 aaKnown RBP16.98■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Rgs9O54828 675 aa16.98■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Llgl2Q3TJ91 1027 aa16.98■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Gm5592Q3V0A6 857 aa16.98■□□□□ 0.31
Rnf4-207ENSMUST00000182709 E4f1Q8CCE9 783 aa16.98■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Bicd2Q921C5 820 aa16.98■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Gdf11Q9Z1W4 405 aa16.98■□□□□ 0.31
Rnf4-207ENSMUST00000182709 Aox1O54754 1333 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms