RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Eif3j2Q66JS6 263 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Adcy3Q8VHH7 1145 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Uap1Q91YN5 522 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 PigoQ9JJI6 1093 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Vnn1Q9Z0K8 512 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ccdc24E9PUW8 296 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cyp2d11P24457 504 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Stim1P70302 685 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 IntuQ059U7 942 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Phactr4Q501J7 694 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tgfb1i1Q62219 461 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Naa16Q9DBB4 864 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Bag3Q9JLV1 577 aaKnown RBP8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Map3k19E9Q3S4 1311 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pde4bB1AWC9 736 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Gcom1E9PZ54 550 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cacna2d1O08532 1103 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Folh1O35409 752 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Hoxa7P02830 229 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 MyzapQ3UIJ9 466 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Skap2Q3UND0 358 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 PsdQ5DTT2 1024 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cep120Q7TSG1 988 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ctdp1Q7TSG2 960 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 BlmhQ8R016 455 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tc2nQ91XT6 489 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Knop1Q9Z2Q2 478 aaKnown RBP8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Adgrb1Q3UHD1 1582 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Spef2Q8C9J3 1734 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cfap99A0A140LIX9 648 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Zscan20B2KFW1 1030 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Fndc1E9Q043 1732 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Foxn2E9Q7L6 429 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Rgs9O54828 675 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cdr2P97817 455 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Myo3bQ1EG27 1305 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Sco1Q5SUC9 284 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tbx2Q60707 711 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Agtpbp1Q641K1 1218 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Btbd11Q6GQW0 1109 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cep170bQ80U49 1574 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ttc12Q8BW49 704 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 E2f4Q8R0K9 410 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tubb6Q922F4 447 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Capn15Q9JLG8 1095 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cdc27A2A6Q5 825 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ets1P27577 440 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Myo1bP46735 1107 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Kcnb1Q03717 857 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pde3bQ61409 1100 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Sh3gl3Q62421 347 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Lmod1Q8BVA4 595 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 LgsnQ8CIX8 563 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Slc26a8Q8R0C3 999 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Q9D9H8 365 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Nek3Q9R0A5 511 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Vstm4T1NXB5 319 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ift172Q6VH22 1749 aa8.67□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Slc30a9Q5IRJ6 567 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 PrimpolQ6P1E7 537 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Phc3Q8CHP6 981 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Erc1Q99MI1 1120 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Rrs1Q9CYH6 365 aaKnown RBP8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 PdhbQ9D051 359 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Scnn1bQ9WU38 638 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Gm10471E9Q1C7 252 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Map2k1P31938 393 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 NeblQ0II04 452 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Emc10Q3TAS6 258 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 BcrQ6PAJ1 1270 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 AopepQ8BXQ6 817 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Hmg20bQ9Z104 317 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Abcc12Q80WJ6 1366 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pbrm1Q8BSQ9 1634 aaKnown RBP8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Gm43638A0A0J9YU36 694 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pola2P33611 600 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tmed8Q3UHI4 326 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Mrps31Q61733 384 aaKnown RBP8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ccdc155Q80VJ8 648 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ccdc181Q80ZU5 509 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 4930504O13RikQ8C5Z9 145 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pms1Q8K119 917 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Terf2ipQ91VL8 393 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 StrbpQ91WM1 672 aaKnown RBP8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Zbtb3Q91X45 518 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Msantd4Q91YU3 345 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ndufab1Q9CR21 156 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Chchd3Q9CRB9 227 aaKnown RBP8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 NapgQ9CWZ7 312 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 ToporslQ9D2F8 683 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Dctpp1Q9QY93 170 aa8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ythdc2B2RR83 1445 aaKnown RBP8.66□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Gm5624F6ZZG8 207 aa8.65□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Enc1O35709 589 aa8.65□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Prpf38aQ4FK66 312 aaKnown RBP8.65□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Lrsam1Q80ZI6 727 aa8.65□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Mphosph10Q810V0 681 aaKnown RBP8.65□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Sox30Q8CGW4 782 aa8.65□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Lrrc42Q8R2U7 421 aa8.65□□□□□ -1.02
Bdnf-209ENSMUST00000111050 SdsQ8VBT2 327 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms