RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Rbbp5Q8BX09 538 aaKnown RBP11.14□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Taf4bG5E8Z2 855 aa11.14□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Klc3Q91W40 508 aa11.14□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Skint5A7XUY5 1461 aa11.14□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Skap1Q3UUV5 355 aa11.14□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Lrrc9Q8CDN9 1456 aa11.14□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Stx8O88983 236 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Osbpl5Q9ER64 874 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Mapkbp1Q6NS57 1503 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Btn2a2A4QPC6 514 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ccdc13D3YV10 709 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Lrrc43Q3V0L5 667 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 U2af2P26369 475 aaKnown RBP11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Fhdc1Q3ULZ2 1149 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Tuft1O08970 390 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 RilpQ5ND29 369 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Astn2Q80Z10 1352 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Tshz3Q8CGV9 1081 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Exoc3l2D3YUP5 789 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ccdc175E9PVB3 822 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Tti2Q8BGV4 512 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Gbp5Q8CFB4 590 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Speer2E9Q9U2 264 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Svs3aF2Z472 265 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Atp8b2P98199 1209 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Slx4ipQ9D7Y9 413 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Stx12Q9ER00 274 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 ClgnP52194 611 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Q3TYL0 343 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Q3UJC8 639 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ccdc110Q3V125 848 aa11.13□□□□□ -0.63
Col4a4-201ENSMUST00000087050 BC005561E9Q5E2 1589 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Trim68Q8K243 485 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Acot9Q9R0X4 439 aaKnown RBP11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Prim1P20664 417 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Rsph3bQ9DA80 389 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 WizO88286 1684 aaKnown RBP11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Rab34Q64008 259 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Csrnp2Q8BGQ2 534 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 SyncQ9EPM5 470 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Fancd2Q80V62 1450 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Mcmdc2E9Q956 681 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Tshz1Q5DTH5 1084 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Klhl20Q8VCK5 604 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Kif5aP33175 1027 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Trim37Q6PCX9 961 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Thoc2B1AZI6 1594 aaKnown RBP11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ppp1r9aH3BJD6 1292 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Lrriq3Q14DL3 633 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Nsrp1Q5NCR9 542 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Cyp7a1Q64505 503 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Elf2Q9JHC9 593 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 EmbP21995 330 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Kif1bpQ6ZPU9 617 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Lin9Q8C735 542 aa11.12□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ak2Q9WTP6 239 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Sbno1Q689Z5 1390 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Trim60Q8VI40 466 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Klf15Q9EPW2 415 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Uspl1Q3ULM6 1089 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 PsdQ5DTT2 1024 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Gsta4P24472 222 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Gm5935Q497S0 212 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Stoml1Q8CI66 399 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Apbb1ipQ8R5A3 670 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Terf2ipQ91VL8 393 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Utp18Q5SSI6 552 aaKnown RBP11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ctnna3Q65CL1 895 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ccdc113Q8C5T8 377 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ccdc105Q9D4K7 499 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Apol7bB1AQP7 369 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Pdrg1P59048 133 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Chpf2Q3UU43 768 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Hand2Q61039 217 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ccdc189Q6NZQ0 333 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Xrcc4Q924T3 326 aa11.11□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Arl1P61211 181 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ppp2r5bQ6PD28 497 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Tex19.1Q99MV2 351 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Tsnaxip1Q99P25 704 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Frmpd1A2AKB4 1549 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Frat1P70339 274 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ifit2Q64112 472 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Pdzrn3Q69ZS0 1063 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Spata2Q8K004 515 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Drc1Q3USS3 753 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Nup58Q8R332 587 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Krt18P05784 423 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Frat2Q8K025 231 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ppfia4B8QI36 1187 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Zfp597E9Q6S0 419 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Pde5aQ8CG03 865 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Trim7Q923T7 510 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Traf1P39428 409 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Ccdc160Q3UYG1 323 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Slf2Q6P9P0 1278 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Traf3ip3Q8C0G2 513 aa11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Riok3Q9DBU3 519 aaKnown RBP11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Edc4Q3UJB9 1406 aaKnown RBP11.1□□□□□ -0.63
Col4a4-201ENSMUST00000087050 Rnf40Q3U319 1001 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 109.8 ms