RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Ppil4Q9CXG3 492 aaKnown RBP25.38■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Cyp3a57D3YYZ0 503 aa25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Hoxa7P02830 229 aa25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Mcm2P97310 904 aa25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Tmprss11eQ5S248 423 aa25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Ankrd13aQ80UP5 588 aa25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Cfap69Q8BH53 942 aa25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Eif2s2Q99L45 331 aaKnown RBP25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Aox4Q3TYQ9 1336 aa25.37■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Nova2D3YVV7 556 aaKnown RBP25.36■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 CnpP16330 420 aa25.36■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Lamc2Q61092 1191 aa25.36■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Psen2Q61144 448 aa25.36■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Usp34Q6ZQ93 3582 aa25.36■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Vps54Q5SPW0 977 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Slain1Q68FF7 579 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Krt40Q6IFX3 439 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Fbxo33Q8VE08 562 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Gbp7Q91Z40 638 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Hps4Q99KG7 671 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Txnrd3Q99MD6 652 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Borcs6Q9D6W8 360 aa25.35■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Washc4Q3UMB9 1173 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Fam228bQ497Q6 232 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Zbtb45Q52KG4 520 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Cdcp1Q5U462 833 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Ppp1r1bQ60829 194 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Socs7Q8VHQ2 579 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Rbm6S4R1W5 1118 aaKnown RBP25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 AfdnQ9QZQ1 1820 aaKnown RBP25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Arrdc4A0A0B4J1F4 415 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 HunkO88866 714 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Cacnb3P54285 484 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Lins1Q3U1D0 764 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Nol8Q3UHX0 1147 aaKnown RBP25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 FliiQ9JJ28 1271 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Bcar3Q9QZK2 820 aa25.34■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Zbtb7aO88939 569 aaKnown RBP25.33■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Tigd5Q499M4 642 aa25.33■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 ZyxQ62523 564 aa25.33■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Ltv1Q6NSQ7 470 aaKnown RBP25.33■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Pxylp1Q8BHA9 480 aa25.33■■□□□ 1.65
Ssbp4-201ENSMUST00000049908 Siah1aP61092 282 aa25.32■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Pla2g4fQ50L41 855 aa25.32■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Cog5Q8C0L8 829 aa25.32■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Prg3Q9JL95 222 aa25.32■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Lbhd1A0A087WPA0 259 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Hoxd11P23813 323 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Tbc1d2bQ3U0J8 965 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Klrg2Q3UM83 387 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Ptpdc1Q6NZK8 747 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Tmem39bQ810L4 492 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Taf5lQ91WQ5 589 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Chmp5Q9D7S9 219 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Epb41l3Q9WV92 929 aa25.31■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Bcorl1A2AQH4 1781 aa25.3■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Secisbp2lQ6A098 1086 aaKnown RBP25.3■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Rdm1Q9CQK3 281 aa25.3■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 MthfsQ9D110 203 aa25.3■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Cry2Q9R194 592 aa25.3■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Grem2O88273 168 aa25.29■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 OsbpQ3B7Z2 805 aa25.29■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Lgr6Q3UVD5 967 aa25.29■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Foxn1Q61575 648 aa25.29■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Gm42688A0A0R3P9D1 673 aa25.28■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Ccdc148Q6P5U8 527 aa25.28■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Ccdc142Q8CAI1 738 aa25.28■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 EhhadhQ9DBM2 718 aa25.28■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Znf697Q569E7 569 aa25.28■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Dhx16G3X8X0 1044 aaKnown RBP25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 L1camP11627 1260 aa25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Il17raQ60943 864 aa25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Senp5Q6NXL6 749 aa25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Erc2Q6PH08 957 aa25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Golim4Q8BXA1 655 aa25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Dbr1Q923B1 550 aa25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 S1pr4Q9Z0L1 386 aa25.27■■□□□ 1.64
Ssbp4-201ENSMUST00000049908 Nkx1-1G3UXB3 402 aa25.26■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Pnmal2G3X9N3 661 aa25.26■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Prkg1P0C605 671 aa25.26■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Mapk4Q6P5G0 583 aa25.26■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Kif18aQ91WD7 886 aa25.26■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Tmod2Q9JKK7 351 aa25.26■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Myh6Q02566 1938 aaKnown RBP25.25■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Adgra3Q7TT36 1310 aa25.25■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Slc4a3P16283 1227 aa25.25■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Ppp4cP97470 307 aa25.25■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 1700018B08RikQ9DA83 213 aa25.25■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Cacna1fQ9JIS7 1985 aa25.25■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Clrn2B2RVW2 232 aa25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Flvcr1B2RXV4 560 aa25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 MycnP03966 462 aaKnown RBP25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Hmox1P14901 289 aa25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 LtbrP50284 415 aa25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Esyt2Q3TZZ7 845 aa25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Gm11437Q5QR91 290 aa25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Trpv1Q704Y3 839 aa25.24■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Zmynd8A2A484 1235 aaKnown RBP25.23■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Rbbp8nlA2ABX0 614 aa25.23■■□□□ 1.63
Ssbp4-201ENSMUST00000049908 Wdr63B2RY71 923 aa25.23■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms