RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-255	ENST00000641733	HAND1	O96004	215 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	IGKV3-20	P01619	116 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	CRYBA1	P05813	215 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	IL3RA	P26951	378 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	RBMX	P38159	391 aa	Known RBP	4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	CDK9	P50750	372 aa	Known RBP	4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	RAB4B	P61018	213 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	BTN3A2	P78410	334 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	EMX1	Q04741	257 aa	Predicted RBP	4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	MEF2C	Q06413	473 aa	Predicted RBP	4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	SSX1	Q16384	188 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	KRTAP27-1	Q3LI81	207 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	MPV17L2	Q567V2	206 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	CENPW	Q5EE01	88 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	OTP	Q5XKR4	325 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	LINC00596	Q86U02	117 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	ZNF440	Q8IYI8	595 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	KCTD4	Q8WVF5	259 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	FAM104A	Q969W3	186 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	SLC35G5	Q96KT7	338 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	OR52E6	Q96RD3	313 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	LINC01587	Q99440	93 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	SIGMAR1	Q99720	223 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	PRSS27	Q9BQR3	290 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	ASB7	Q9H672	318 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	HES4	Q9HCC6	221 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	C14orf166	Q9Y224	244 aa	Known RBP	4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	POMP	Q9Y244	141 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	SPG11	Q96JI7	2443 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	ABCA2	Q9BZC7	2435 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	SVIL	O95425	2214 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	MED13	Q9UHV7	2174 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	TRIP11	Q15643	1979 aa		4.41	□□□□□ -1.7
CASC19-255	ENST00000641733	IGLV11-55	A0A075B6I3	123 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	IGHV3-66	A0A0C4DH42	116 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	KLF18	A0A0U1RQI7	1052 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	C5orf49	A4QMS7	147 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	DISC1	C4P0D8	188 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	C8orf87	E5RJ46	101 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	EPPIN	O95925	133 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	IGLV2-23	P01705	113 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	CD5	P06127	495 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	HIST1H3A	P68431	136 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	H3F3A	P84243	136 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	YIF1B	Q5BJH7	314 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	FAM71E1	Q6IPT2	247 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	ZNF774	Q6NX45	483 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	FBXL22	Q6P050	247 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	ZNF773	Q6PK81	442 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	HIST2H3A	Q71DI3	136 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	MYPOP	Q86VE0	399 aa	Predicted RBP	4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	OR1L8	Q8NGR8	309 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	OR1L1	Q8NH94	360 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	OR2V1	Q8NHB1	315 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	TNFAIP8L1	Q8WVP5	186 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	SLC35E1	Q96K37	410 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	RNF157	Q96PX1	679 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	ZNF717	Q9BY31	904 aa	Predicted RBP	4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	MMP26	Q9NRE1	261 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	ZNF223	Q9UK11	482 aa	Predicted RBP	4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	PSG11	Q9UQ72	335 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	HDGFL3	Q9Y3E1	203 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	ANK1	P16157	1881 aa		4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	SPEN	Q96T58	3664 aa	Known RBP	4.4	□□□□□ -1.7
CASC19-255	ENST00000641733	NF1	P21359	2839 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	MTOR	P42345	2549 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	ZFP92	A6NM28	416 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	EVPLL	A8MZ36	301 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	TRIM49D1	C9J1S8	452 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	FFAR1	O14842	300 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	GYG2	O15488	501 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	CHP2	O43745	196 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	INS	P01308	110 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	IFNA14	P01570	189 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	SOD3	P08294	240 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	CXCL3	P19876	107 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	CRIP2	P52943	208 aa	Predicted RBP	4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	S100A12	P80511	92 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	HPCA	P84074	193 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	PYCR3	Q53H96	274 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	GSG1L	Q6UXU4	331 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	ZBTB8OS	Q8IWT0	167 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	ARIH2OS	Q8N7S6	290 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	SUMF2	Q8NBJ7	301 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	OR2M7	Q8NG81	312 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	OR52P1P	Q8NH57	321 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	MCFD2	Q8NI22	146 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	COQ8A	Q8NI60	647 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	SLC35B4	Q969S0	331 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	OLFM3	Q96PB7	478 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	PAK5	Q9P286	719 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	ZNF225	Q9UK10	706 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	HHLA2	Q9UM44	414 aa		4.4	□□□□□ -1.71
CASC19-255	ENST00000641733	ADGRG4	Q8IZF6	3080 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms