RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 KRTAP24-1Q3LI83 254 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 DHRS7BQ6IAN0 325 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 PLET1Q6UQ28 207 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 OR5R1Q8NH85 324 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 CD300LFQ8TDQ1 290 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 SSMEM1Q8WWF3 244 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 CAPSLQ8WWF8 208 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 TMEM158Q8WZ71 300 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 DUX5Q96PT3 197 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 ALX4Q9H161 411 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 NAA60Q9H7X0 242 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 COL6A5A8TX70 2615 aa15.9■□□□□ 0.14
PDLIM2-221ENST00000622702 TRAV6A0A075B6T7 132 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 TEX13DA0A0J9YY54 714 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 C3orf85A0A1B0GTC6 90 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 DNAJC9-AS1A6NH13 148 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 H0Y980 276 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 H3BUX3 64 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 H7C2Y5 167 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 FCGR3BO75015 233 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 IGKV1D-33P01593 117 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 IGKV1-33P01594 117 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 CD24P25063 80 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 SGPP2Q8IWX5 399 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 SPAG16Q8N0X2 631 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 OR2T10Q8NGZ9 312 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 GALNT14Q96FL9 552 aa15.89■□□□□ 0.13
PDLIM2-221ENST00000622702 TRIM77I1YAP6 450 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 MOSP00540 346 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 IGHV4-59P01825 116 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 IGKV1-16P04430 117 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 SPNP16150 400 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 ANXA7P20073 488 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 RAG2P55895 527 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 SUPT4H1P63272 117 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 CBX3Q13185 183 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 TMEM177Q53S58 311 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 OR2B11Q5JQS5 317 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 C11orf88Q6PI97 169 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 TMEM86BQ8N661 226 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 OR4C13Q8NGP0 309 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 OR4S2Q8NH73 311 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 EAF1Q96JC9 268 aaPredicted RBP15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 TP53RKQ96S44 253 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 MARVELD1Q9BSK0 173 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 TCF19Q9Y242 345 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 POMT1Q9Y6A1 747 aa15.88■□□□□ 0.13
PDLIM2-221ENST00000622702 HOXA3O43365 443 aaPredicted RBP15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 RAMP3O60896 148 aa15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 PEX14O75381 377 aa15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 UBA52P62987 128 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 SLC9A3R2Q15599 337 aa15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 Q8N6K4 173 aa15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 FLYWCH2Q96CP2 140 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 RNF5Q99942 180 aa15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 KCNIP3Q9Y2W7 256 aa15.87■□□□□ 0.13
PDLIM2-221ENST00000622702 A6NDX4 124 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 BTBD17A6NE02 478 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 CRYZL1O95825 349 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 OR5AC1P0C628 307 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 UCP1P25874 307 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 PPP1R1AQ13522 171 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 HES1Q14469 280 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 OXA1LQ15070 435 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 ZNF585BQ52M93 769 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 FBLN7Q53RD9 439 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 CCBE1Q6UXH8 406 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 OSR1Q8TAX0 266 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 RBMXL1Q96E39 390 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 PLEKHA2Q9HB19 425 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 PITPNC1Q9UKF7 332 aa15.86■□□□□ 0.13
PDLIM2-221ENST00000622702 OR4E1P0C645 316 aa15.85■□□□□ 0.13
PDLIM2-221ENST00000622702 VSIG10L2P0DP72 767 aa15.85■□□□□ 0.13
PDLIM2-221ENST00000622702 TMEM11P17152 192 aa15.85■□□□□ 0.13
PDLIM2-221ENST00000622702 GLYATL2Q8WU03 294 aa15.85■□□□□ 0.13
PDLIM2-221ENST00000622702 TMEM222Q9H0R3 208 aa15.85■□□□□ 0.13
PDLIM2-221ENST00000622702 TNFRSF19Q9NS68 423 aa15.85■□□□□ 0.13
PDLIM2-221ENST00000622702 VPREB3Q9UKI3 123 aa15.85■□□□□ 0.13
PDLIM2-221ENST00000622702 INMT-MINDY4F8WBC2 141 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 CLDN34H7C241 214 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 SFT2D2O95562 160 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 HPRT1P00492 218 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 ANXA3P12429 323 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 RPA2P15927 270 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 LGALS7P47929 136 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 HNF4GQ14541 408 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 SP6Q3SY56 376 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 OR8H1Q8NGG4 311 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 RITA1Q96K30 269 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 C19orf24Q9BVV8 132 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 COMMD9Q9P000 198 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 C9orf170A2RU37 121 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 SERPINE2P07093 398 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 VAMP1P23763 118 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 LPAR6P43657 344 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 RAB25P57735 213 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 RPS16P62249 146 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 DHRS2Q13268 280 aa15.84■□□□□ 0.13
PDLIM2-221ENST00000622702 TMEM187Q14656 261 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms