RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 VAX1Q5SQQ9 334 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 OR5T1Q8NG75 326 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 DDB2Q92466 427 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 RHOVQ96L33 236 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 LSM4Q9Y4Z0 139 aaKnown RBP13.25□□□□□ -0.29
HMGN3-203ENST00000620514 COL7A1Q02388 2944 aa13.25□□□□□ -0.29
HMGN3-203ENST00000620514 LOC100506127A0A0U1RQW1 187 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 SHOXO15266 292 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 SSX5O60225 188 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 TRGV3P03979 118 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 NFYAP23511 347 aaPredicted RBP13.24□□□□□ -0.29
HMGN3-203ENST00000620514 NEDD8Q15843 81 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 RTL8BQ17RB0 113 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 MRGPRG-AS1Q2M3A8 158 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 OR5H6Q8NGV6 325 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 ZNF355PQ9NSJ1 428 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 RHBDL2Q9NX52 303 aa13.24□□□□□ -0.29
HMGN3-203ENST00000620514 CRYZL1O95825 349 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 CD36P16671 472 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 GNG2P59768 71 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
HMGN3-203ENST00000620514 CBX3Q13185 183 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 DCTN2Q13561 401 aaKnown RBP13.23□□□□□ -0.29
HMGN3-203ENST00000620514 POC5Q8NA72 575 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 ADTRPQ96IZ2 230 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 CENPOQ9BU64 300 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 DCSTAMPQ9H295 470 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 SLA2Q9H6Q3 261 aa13.23□□□□□ -0.29
HMGN3-203ENST00000620514 ZNF256Q9Y2P7 627 aaPredicted RBP13.23□□□□□ -0.29
HMGN3-203ENST00000620514 IGKV1D-13A0A0B4J2D9 117 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 SAP30O75446 220 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 LY86O95711 162 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 HSPB1P04792 205 aaKnown RBP13.22□□□□□ -0.29
HMGN3-203ENST00000620514 IGKV1-13P0DP09 117 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 RRASP10301 218 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 CD40LGP29965 261 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 INSL3P51460 131 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 DEFA5Q01523 94 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 IDNKQ5T6J7 187 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 IDO2Q6ZQW0 420 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 ZNF429Q86V71 674 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 SLC25A38Q96DW6 304 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
HMGN3-203ENST00000620514 SCGNO76038 276 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 HLA-DQB1P01920 261 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 CTXN2P0C2S0 81 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 APELAP0DMC3 54 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 UBE2KP61086 200 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 PITPNAQ00169 270 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 VMA21Q3ZAQ7 101 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 KCTD21Q4G0X4 260 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 CNIH2Q6PI25 160 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 ZNF645Q8N7E2 425 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 ANXA10Q9UJ72 324 aa13.21□□□□□ -0.29
HMGN3-203ENST00000620514 TRAV18A0A075B6X5 111 aa13.2□□□□□ -0.3
HMGN3-203ENST00000620514 IGLV2-14P01704 120 aa13.2□□□□□ -0.3
HMGN3-203ENST00000620514 TGFBR1P36897 503 aa13.2□□□□□ -0.3
HMGN3-203ENST00000620514 RPL30P62888 115 aaKnown RBP13.2□□□□□ -0.3
HMGN3-203ENST00000620514 PRSS8Q16651 343 aa13.2□□□□□ -0.3
HMGN3-203ENST00000620514 OR2B11Q5JQS5 317 aa13.2□□□□□ -0.3
HMGN3-203ENST00000620514 ACSM6Q6P461 480 aa13.2□□□□□ -0.3
HMGN3-203ENST00000620514 TEX45Q8NA69 505 aa13.2□□□□□ -0.3
HMGN3-203ENST00000620514 RBMX2Q9Y388 322 aaKnown RBP13.2□□□□□ -0.3
HMGN3-203ENST00000620514 C13orf42A0A1B0GVH6 325 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 ANKRD34BA5PLL1 514 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 MSGN1A6NI15 193 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 H3BUA1 57 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 FCGR3BO75015 233 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 TUSC2O75896 110 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 SAA1P0DJI8 122 aaPredicted RBP13.19□□□□□ -0.3
HMGN3-203ENST00000620514 PTHLHP12272 177 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 TNXAQ16473 311 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 GVQW1Q8N7I0 195 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 OSR1Q8TAX0 266 aaPredicted RBP13.19□□□□□ -0.3
HMGN3-203ENST00000620514 PHB2Q99623 299 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 ASCL2Q99929 193 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 ETV7Q9Y603 341 aa13.19□□□□□ -0.3
HMGN3-203ENST00000620514 RBMXL2O75526 392 aaKnown RBP13.18□□□□□ -0.3
HMGN3-203ENST00000620514 SPNP16150 400 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 SCAND1P57086 179 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 HAPLN4Q86UW8 402 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 SRSF12Q8WXF0 261 aaKnown RBP13.18□□□□□ -0.3
HMGN3-203ENST00000620514 ACOT12Q8WYK0 555 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 TMEM68Q96MH6 324 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 GPHA2Q96T91 129 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 DCUN1D5Q9BTE7 237 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 TINAGL1Q9GZM7 467 aaPredicted RBP13.18□□□□□ -0.3
HMGN3-203ENST00000620514 COA4Q9NYJ1 87 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 TNCP24821 2201 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 SORL1Q92673 2214 aa13.18□□□□□ -0.3
HMGN3-203ENST00000620514 A0A0G2JLM5 398 aa13.17□□□□□ -0.3
HMGN3-203ENST00000620514 FCER2P06734 321 aa13.17□□□□□ -0.3
HMGN3-203ENST00000620514 EIF4EBP1Q13541 118 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-203ENST00000620514 C10orf55Q5SWW7 151 aa13.17□□□□□ -0.3
HMGN3-203ENST00000620514 BEST4Q8NFU0 473 aa13.17□□□□□ -0.3
HMGN3-203ENST00000620514 ZNF430Q9H8G1 570 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-203ENST00000620514 RANGRFQ9HD47 186 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-203ENST00000620514 SLC22A5O76082 557 aa13.16□□□□□ -0.3
HMGN3-203ENST00000620514 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms