RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 COX5AP20674 150 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 KITLGP21583 273 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 DLX1P56177 255 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 LINC01560Q8TB33 94 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 COQ2Q96H96 371 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 CABLES2Q9BTV7 478 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 PIGBOS1A0A0B4J2F0 54 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 NKX6-3A6NJ46 265 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 MYOD1P15172 320 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 S100PP25815 95 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 RPL31P62899 125 aaKnown RBP9.46□□□□□ -0.89
TOP3A-217ENST00000584582 RBPJQ06330 500 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 ARL16Q0P5N6 197 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 HMGN3Q15651 99 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 CD177Q8N6Q3 437 aa9.46□□□□□ -0.89
TOP3A-217ENST00000584582 OR7C2O60412 319 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 ID3Q02535 119 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 TFF3Q07654 80 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 NMSQ5H8A3 153 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 GCSAMLQ5JQS6 135 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 LINC00596Q86U02 117 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 MEGF10Q96KG7 1140 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 CALYQ9NYX4 217 aa9.46□□□□□ -0.9
TOP3A-217ENST00000584582 PTPN13Q12923 2485 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 MGST3O14880 152 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 CCL3L1P16619 93 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 RAB31Q13636 194 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 WDR25Q64LD2 544 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-217ENST00000584582 FAM122AQ96E09 287 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 DOPEY2Q9Y3R5 2298 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 USP9YO00507 2555 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-217ENST00000584582 GINS3Q9BRX5 216 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 ACTR3CQ9C0K3 210 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-217ENST00000584582 COMMD5Q9GZQ3 224 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 TIMM8BQ9Y5J9 83 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-217ENST00000584582 SETD2Q9BYW2 2564 aaPredicted RBP9.45□□□□□ -0.9
TOP3A-217ENST00000584582 CPAMD8Q8IZJ3 1885 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 LINC00473A8K010 186 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 PRSS44E7EML9 344 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 C17orf112F2Z3M2 114 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 EIF4E3Q8N5X7 224 aaKnown RBP9.45□□□□□ -0.9
TOP3A-217ENST00000584582 TAF15Q92804 592 aaKnown RBP eCLIP9.45□□□□□ -0.9
TOP3A-217ENST00000584582 OR6C3Q9NZP0 311 aa9.45□□□□□ -0.9
TOP3A-217ENST00000584582 CCDC168Q8NDH2 2452 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 H7BYZ3 331 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 CEACAM1P13688 526 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 CTRB1P17538 263 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 TNFRSF1AP19438 455 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 HES1Q14469 280 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 CTRB2Q6GPI1 263 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 GATAD1Q8WUU5 269 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 SLC35D1Q9NTN3 355 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 IGKV1-39P01597 117 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 IGKV1D-39P04432 117 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 IL15RAQ13261 267 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 C1orf87Q8N0U7 546 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
TOP3A-217ENST00000584582 CD40P25942 277 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 BSPH1Q075Z2 132 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 ZNF585BQ52M93 769 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 GCSAMQ8N6F7 178 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 HSD17B10Q99714 261 aaKnown RBP9.44□□□□□ -0.9
TOP3A-217ENST00000584582 CENPEQ02224 2701 aa9.44□□□□□ -0.9
TOP3A-217ENST00000584582 TRAV3A0A0B4J244 114 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 SLC31A2O15432 143 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 TNFSF13O75888 250 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 YIF1AO95070 293 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
TOP3A-217ENST00000584582 TMEM37Q8WXS4 190 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 NEUROG1Q92886 237 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 CIB3Q96Q77 187 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-217ENST00000584582 TMEM147Q9BVK8 224 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 NGBQ9NPG2 151 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 NDUFB3O43676 98 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 OR5G3P0C626 314 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 GATA2P23769 480 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-217ENST00000584582 ZNF146Q15072 292 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 LRTM2Q8N967 370 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 TMEM140Q9NV12 185 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 SLC25A10Q9UBX3 287 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-217ENST00000584582 TNRC6AQ8NDV7 1962 aaKnown RBP9.43□□□□□ -0.9
TOP3A-217ENST00000584582 KIAA1549Q9HCM3 1950 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 DVL1O14640 695 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 LY6HO94772 140 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 PLAUP00749 431 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 APOA2P02652 100 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 MGST1P10620 155 aaKnown RBP9.43□□□□□ -0.9
TOP3A-217ENST00000584582 RAB5AP20339 215 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 GLRXP35754 106 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 CDC34P49427 236 aaPredicted RBP9.43□□□□□ -0.9
TOP3A-217ENST00000584582 TIMM23BQ5SRD1 257 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 MOB3BQ86TA1 216 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 KIAA1456Q9P272 454 aa9.43□□□□□ -0.9
TOP3A-217ENST00000584582 FAM157AC9JC47 383 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 REG1AP05451 166 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 RTL8BQ17RB0 113 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 SLC35E4Q6ICL7 350 aa9.42□□□□□ -0.9
TOP3A-217ENST00000584582 RAB24Q969Q5 203 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms