RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 HUWE1Q7Z6Z7 4374 aaKnown RBP9.19□□□□□ -0.94
LITAF-219ENST00000576334 LOC100506127A0A0U1RQW1 187 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 METTL21EPA6NDL7 271 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 SSX5O60225 188 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 APOA2P02652 100 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 NFYAP23511 347 aaPredicted RBP9.18□□□□□ -0.94
LITAF-219ENST00000576334 TALDO1P37837 337 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 SERPINB10P48595 397 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 TMBIM6P55061 237 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 TPPP2P59282 170 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 TAGLNQ01995 201 aaKnown RBP9.18□□□□□ -0.94
LITAF-219ENST00000576334 CD69Q07108 199 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 SFXN4Q6P4A7 337 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 HAPLN4Q86UW8 402 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 H1FOOQ8IZA3 346 aaPredicted RBP9.18□□□□□ -0.94
LITAF-219ENST00000576334 ARPC1AQ92747 370 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 SLC25A38Q96DW6 304 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 HARBI1Q96MB7 349 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 GPHA2Q96T91 129 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 TSNAXQ99598 290 aaKnown RBP9.18□□□□□ -0.94
LITAF-219ENST00000576334 RNF5Q99942 180 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 GINS4Q9BRT9 223 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 CENPOQ9BU64 300 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 SSR3Q9UNL2 185 aa9.18□□□□□ -0.94
LITAF-219ENST00000576334 RBM7Q9Y580 266 aaKnown RBP9.18□□□□□ -0.94
LITAF-219ENST00000576334 IGKV1D-13A0A0B4J2D9 117 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 CCDC160A6NGH7 325 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 RBMXL2O75526 392 aaKnown RBP9.17□□□□□ -0.94
LITAF-219ENST00000576334 IGKV1-13P0DP09 117 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 RPL30P62888 115 aaKnown RBP9.17□□□□□ -0.94
LITAF-219ENST00000576334 AKIRIN2Q53H80 203 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 OR2B11Q5JQS5 317 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 GPR107Q5VW38 600 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 HACD4Q5VWC8 232 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.17□□□□□ -0.94
LITAF-219ENST00000576334 DDB2Q92466 427 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 FCGR1BQ92637 280 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 B9D2Q9BPU9 175 aa9.17□□□□□ -0.94
LITAF-219ENST00000576334 LSM4Q9Y4Z0 139 aaKnown RBP9.17□□□□□ -0.94
LITAF-219ENST00000576334 TNCP24821 2201 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 LINC01619G3V211 115 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 OVOL1O14753 267 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 SHOXO15266 292 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 SPDEFO95238 335 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 CNIH1O95406 144 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 CRYZL1O95825 349 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 IGLV2-14P01704 120 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 TRGV3P03979 118 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 LGALS1P09382 135 aaKnown RBP9.16□□□□□ -0.94
LITAF-219ENST00000576334 OR8U8P0C7N1 319 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 CD36P16671 472 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 DUTP33316 252 aaKnown RBP9.16□□□□□ -0.94
LITAF-219ENST00000576334 TMEM267Q0VDI3 215 aaPredicted RBP9.16□□□□□ -0.94
LITAF-219ENST00000576334 TMEM177Q53S58 311 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 IDNKQ5T6J7 187 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 Q6ZS49 121 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 GVQW1Q8N7I0 195 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 YIPF6Q96EC8 236 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 RHOVQ96L33 236 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 ASCL2Q99929 193 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.16□□□□□ -0.941e-31■■■■■ 117.6
LITAF-219ENST00000576334 ZNF355PQ9NSJ1 428 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 RHBDL2Q9NX52 303 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 ADAM30Q9UKF2 790 aa9.16□□□□□ -0.94
LITAF-219ENST00000576334 RYR3Q15413 4870 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 ANKRD34BA5PLL1 514 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 SAP30O75446 220 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 GABARAPO95166 117 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 LY86O95711 162 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 DTYMKP23919 212 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 GNG2P59768 71 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 SRSF7Q16629 238 aaKnown RBP eCLIP9.15□□□□□ -0.94
LITAF-219ENST00000576334 VAX1Q5SQQ9 334 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 C10orf55Q5SWW7 151 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 TPRA1Q86W33 373 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 ANKRD13BQ86YJ7 626 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 TCTEX1D1Q8N7M0 179 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 BCL7BQ9BQE9 202 aa9.15□□□□□ -0.94
LITAF-219ENST00000576334 TRAV18A0A075B6X5 111 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 MSGN1A6NI15 193 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 RAMP3O60896 148 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 FCGR3BO75015 233 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 TUSC2O75896 110 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 TRBV12-3P01733 135 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 PRH1P02810 166 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 SPNP16150 400 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 RANBP1P43487 201 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 LGALS7P47929 136 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 BRWD1-AS2P59051 145 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 LSM3P62310 102 aaKnown RBP9.14□□□□□ -0.95
LITAF-219ENST00000576334 TNXAQ16473 311 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 CTF1Q16619 201 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 C19orf35Q6ZS72 473 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 VKORC1L1Q8N0U8 176 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 POC5Q8NA72 575 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 RAB2BQ8WUD1 216 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 FUNDC2Q9BWH2 189 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 ZNF256Q9Y2P7 627 aaPredicted RBP9.14□□□□□ -0.95
LITAF-219ENST00000576334 NBEAL2Q6ZNJ1 2754 aa9.14□□□□□ -0.95
LITAF-219ENST00000576334 SORL1Q92673 2214 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms