RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TMEM204Q9BSN7 226 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 IFI27L2Q9H2X8 130 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 GFOD1Q9NXC2 390 aa7.77□□□□□ -1.17
LINC00838-201ENST00000562956 PKDREJQ9NTG1 2253 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 RAI1Q7Z5J4 1906 aaPredicted RBP7.76□□□□□ -1.17
LINC00838-201ENST00000562956 IGSF23A1L1A6 192 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 M0R036 132 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 WRBO00258 174 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 UBE2CO00762 179 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 S1PR2O95136 353 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 OR8U8P0C7N1 319 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 G6PCP35575 357 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 ERVFRD-1P60508 538 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 CATR1Q13166 79 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 PDZD11Q5EBL8 140 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF66Q6ZN08 573 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 C1orf229Q6ZS94 237 aaPredicted RBP7.76□□□□□ -1.17
LINC00838-201ENST00000562956 FAM24BQ8N5W8 94 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 C19orf12Q9NSK7 152 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 CARHSP1Q9Y2V2 147 aaKnown RBP7.76□□□□□ -1.17
LINC00838-201ENST00000562956 A0A1B0GV50 99 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 CXorf65A6NEN9 183 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 LYNX1G3V0Z9 82 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 KRASP01116 189 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 LYNX1P0DP58 116 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 GNLYP22749 145 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF124Q15973 351 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 CT45A1Q5HYN5 189 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 NCR3LG1Q68D85 454 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 ODF3L1Q8IXM7 274 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF295-AS1Q8N0V1 137 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 CT45A3Q8NHU0 189 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 CORO2AQ92828 525 aa7.76□□□□□ -1.17
LINC00838-201ENST00000562956 HSD17B10Q99714 261 aaKnown RBP7.76□□□□□ -1.17
LINC00838-201ENST00000562956 LYRM2Q9NU23 88 aaPredicted RBP7.76□□□□□ -1.17
LINC00838-201ENST00000562956 ANKHD1Q8IWZ3 2542 aaKnown RBP7.76□□□□□ -1.17
LINC00838-201ENST00000562956 ZG16O60844 167 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 FBXO24O75426 580 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 FBP1P09467 338 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 DUTP33316 252 aaKnown RBP7.75□□□□□ -1.17
LINC00838-201ENST00000562956 PAX9P55771 341 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 VAMP2P63027 116 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 PRAMEF5Q5TYX0 476 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 SSX9Q7RTT3 188 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 ABHD14AQ9BUJ0 271 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 GGACTQ9BVM4 153 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 SEC11CQ9BY50 192 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 PRO1933Q9H354 126 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 LINC00574Q9H8X3 128 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 SMCO4Q9NRQ5 59 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 CTSZQ9UBR2 303 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 TPRP12270 2363 aaKnown RBP7.75□□□□□ -1.17
LINC00838-201ENST00000562956 hADV38S2A0JD32 116 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF729A6NN14 1252 aaPredicted RBP7.75□□□□□ -1.17
LINC00838-201ENST00000562956 JTBO76095 146 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 GAPDHP04406 335 aaKnown RBP7.75□□□□□ -1.17
LINC00838-201ENST00000562956 P0C879 139 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 RPL31P62899 125 aaKnown RBP7.75□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF383Q8NA42 475 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 FAM122AQ96E09 287 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 RAB9BQ9NP90 201 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 IDI2-AS1Q9NZ38 188 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 MMP24Q9Y5R2 645 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 LINC00312Q9Y6C7 94 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 LRBAP50851 2863 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 RNASEK-C17orf49H0YIS7 233 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 M0R1X1 148 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 MED6O75586 246 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 FAM157CP0CG43 387 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 COL8A2P25067 703 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 RAB2AP61019 212 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 PJVKQ0ZLH3 352 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 TMEM252Q8N6L7 170 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 UBAC2Q8NBM4 344 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 ZNF439Q8NDP4 499 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 FAM216AQ8WUB2 273 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 RNF141Q8WVD5 230 aa7.75□□□□□ -1.17
LINC00838-201ENST00000562956 H3BP45 60 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 DVL1O14640 695 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 FGF16O43320 207 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 MMP9P14780 707 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 GNG10P50151 68 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 RNF212Q495C1 297 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 C4orf17Q53FE4 359 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 TMEM200BQ69YZ2 307 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 TCTEX1D1Q8N7M0 179 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 PLA2G2EQ9NZK7 142 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 SAA2-SAA4A0A096LPE2 208 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 ITGB1BP1O14713 200 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 FCGR3BO75015 233 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 CST7O76096 145 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 SAA2P0DJI9 122 aaPredicted RBP7.74□□□□□ -1.17
LINC00838-201ENST00000562956 IAPPP10997 89 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 CCL3L1P16619 93 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 EIF5AP63241 154 aaKnown RBP7.74□□□□□ -1.17
LINC00838-201ENST00000562956 ITLN2Q8WWU7 325 aaPredicted RBP7.74□□□□□ -1.17
LINC00838-201ENST00000562956 H1FXQ92522 213 aaKnown RBP7.74□□□□□ -1.17
LINC00838-201ENST00000562956 MMP26Q9NRE1 261 aa7.74□□□□□ -1.17
LINC00838-201ENST00000562956 FAM212BQ9NTI7 297 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms