RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 FGF21Q9NSA1 209 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM252Q8N6L7 170 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 RGPD1P0DJD0 1748 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 C1QL3Q5VWW1 255 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 LRRC29Q8WV35 223 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 C20orf78Q9BR46 151 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 DOCK11Q5JSL3 2073 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 TRAV25A0A0B4J276 109 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 K7EMI3 77 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 ASAH2BP0C7U1 165 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 AREGP15514 252 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 VDAC1P21796 283 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 BCORP1Q8N888 145 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 SLX4Q8IY92 1834 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A1W2PS18 150 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 WIPF3A6NGB9 483 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 K7N7A8 449 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 ZIC3O60481 467 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 FKBP1BP68106 108 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 DEFB119Q8N690 84 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM242Q9NWH2 141 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 TMEM160Q9NX00 188 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 ALPK2Q86TB3 2170 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 MED12Q93074 2177 aa7.72□□□□□ -1.17
GTF2A1-203ENST00000553612 SRSF1Q07955 248 aaKnown RBP eCLIP7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 ZNF474Q6S9Z5 364 aaPredicted RBP7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 WDR5BQ86VZ2 330 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 HOGA1Q86XE5 327 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 RPS4Y2Q8TD47 263 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 CACNG5Q9UF02 275 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 PARP4Q9UKK3 1724 aaKnown RBP7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 SCN1AP35498 2009 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 A0A1B0GW64 132 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 ERVK-16P61578 105 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 OR2L13Q8N349 312 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 PP6455Q8WZ26 134 aa7.71□□□□□ -1.17
GTF2A1-203ENST00000553612 C3orf85A0A1B0GTC6 90 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 HLA-DQA1P01909 254 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 FCGR2BP31994 310 aaPredicted RBP7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 RPL8P62917 257 aaKnown RBP7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 RPL18Q07020 188 aaKnown RBP7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 MDC1Q14676 2089 aaKnown RBP7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF56Q15929 161 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 GAGE2AQ6NT46 116 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 POU2AF1Q16633 256 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 MORN4Q8NDC4 146 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 OR2W1Q9Y3N9 320 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 KCPQ6ZWJ8 1503 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 SCN5AQ14524 2016 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 IGSF23A1L1A6 192 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 DHHO43323 396 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 KLK8O60259 260 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 THY1P04216 161 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 PAX9P55771 341 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 ZNF595Q8IYB9 648 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 CDRT4Q8N9R6 151 aa7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 TSACCQ96A04 125 aaPredicted RBP7.71□□□□□ -1.18
GTF2A1-203ENST00000553612 TRAV38-1A0A0B4J264 116 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 C9JAW5 83 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 PPP1R27Q86WC6 154 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 NUP37Q8NFH4 326 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 FOXQ1Q9C009 403 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 HIGD1AQ9Y241 93 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 NPIPB11E5RHQ5 1161 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 HOXB9P17482 250 aaPredicted RBP7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 BCL3P20749 454 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 SRYQ05066 204 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 SDF2Q99470 211 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 FBXL15Q9H469 300 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 VSIRQ9H7M9 311 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 A8MWV9 139 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 RER1O15258 196 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 CELA3BP08861 270 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 TMEM215Q68D42 235 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 SCN3AQ9NY46 2000 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 FMN2Q9NZ56 1722 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 C1orf167Q5SNV9 1468 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 KNL1Q8NG31 2342 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 RND2P52198 227 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 NT5CQ8TCD5 201 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 KIR2DL4Q99706 377 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 KIR2DS3K7RE56 304 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 HSPE1P61604 102 aaKnown RBP7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 C1orf61Q13536 156 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 KIR2DS3Q14952 304 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 SPATA46Q5T0L3 261 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 BRK1Q8WUW1 75 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 SIGLEC12Q96PQ1 595 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 PBOV1Q9GZY1 135 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 MPDZO75970 2070 aa7.7□□□□□ -1.18
GTF2A1-203ENST00000553612 LOC107984640A0A0U1RRK4 108 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 SH2D7A6NKC9 451 aaPredicted RBP7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 PTGESO14684 152 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 IGHV3-9P01782 118 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 HRCT1Q6UXD1 115 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 PQLC2Q6ZP29 291 aa7.69□□□□□ -1.18
GTF2A1-203ENST00000553612 H2BFWTQ7Z2G1 175 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms