RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RBFOX2O43251 390 aaKnown RBP eCLIP2.81□□□□□ -1.96
SCAF11-210ENST00000547654 SERPINA1P01009 418 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 CRYBA1P05813 215 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 CCL5P13501 91 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 GTF2F2P13984 249 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 UCHL3P15374 230 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 ALOX5APP20292 161 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 DDTP30046 118 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 MPIP34949 423 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 OPRK1P41145 380 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 MAGEA12P43365 314 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 GABARAPL2P60520 117 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 PFN3P60673 137 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 RANP62826 216 aaKnown RBP2.81□□□□□ -1.96
SCAF11-210ENST00000547654 OR2F1Q13607 317 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 EBPQ15125 230 aaKnown RBP2.81□□□□□ -1.96
SCAF11-210ENST00000547654 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 ELP2Q6IA86 826 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 OR10K2Q6IF99 312 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 FAM19A3Q7Z5A8 133 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 DPPA2Q7Z7J5 298 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 LINC01551Q86U37 167 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 TMEM161BQ8NDZ6 487 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 OR51H1Q8NH63 302 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 LINC01560Q8TB33 94 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 PHOSPHO2Q8TCD6 241 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 RBMXL1Q96E39 390 aaKnown RBP2.81□□□□□ -1.96
SCAF11-210ENST00000547654 OR7D2Q96RA2 312 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF717Q9BY31 904 aaPredicted RBP2.81□□□□□ -1.96
SCAF11-210ENST00000547654 OR51I1Q9H343 314 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 PDFQ9HBH1 243 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 HES4Q9HCC6 221 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 XPNPEP1Q9NQW7 623 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF331Q9NQX6 463 aaPredicted RBP2.81□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 RPS6KB2Q9UBS0 482 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 LINC00527Q9UJ94 153 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 YTHDF2Q9Y5A9 579 aaKnown RBP2.81□□□□□ -1.96
SCAF11-210ENST00000547654 CLUHO75153 1309 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 TMEM131Q92545 1883 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 IGF2RP11717 2491 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 PIEZO2Q9H5I5 2752 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 FBN2P35556 2912 aa2.81□□□□□ -1.96
SCAF11-210ENST00000547654 LAMA5O15230 3695 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 CNOT1A5YKK6 2376 aaKnown RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 C2CD3Q4AC94 2353 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 OTOGLQ3ZCN5 2332 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 PLXNB2O15031 1838 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 PHIPQ8WWQ0 1821 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 ARAP2Q8WZ64 1704 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 IGHV1-3A0A0C4DH29 117 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 WI2-2373I1.2A0A1W2PRP0 233 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 CLDN24A6NM45 220 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 BTNL10A8MVZ5 291 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 F5H5P2 479 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 TMEM250H0YL14 139 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 DENRO43583 198 aaKnown RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 CDRT1O95170 752 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 ATP5G1P05496 136 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 CTSEP14091 401 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 NELFEP18615 380 aaKnown RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 ELK1P19419 428 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 CXCL2P19875 107 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 PRPS1L1P21108 318 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 S100A2P29034 98 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 SPCS3P61009 180 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 NAA20P61599 178 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 SNCBQ16143 134 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 DEFB116Q30KQ4 102 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF658BQ4V348 819 aaPredicted RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 TRMT12Q53H54 448 aaKnown RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 TMEM215Q68D42 235 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 MORN3Q6PF18 240 aaPredicted RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 HIST2H3AQ71DI3 136 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 TCF23Q7RTU1 214 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 VN1R4Q7Z5H5 301 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 WDR86Q86TI4 376 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 CLDN22Q8N7P3 220 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 CYB561D1Q8N8Q1 229 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 JOSD2Q8TAC2 188 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 EEF1AKMT1Q8WVE0 214 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 SLC25A46Q96AG3 418 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 APOBEC3DQ96AK3 386 aaPredicted RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 L3HYPDHQ96EM0 354 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 GPR82Q96P67 336 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 ZIM3Q96PE6 472 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 PHB2Q99623 299 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 FKBP14Q9NWM8 211 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 GLTPQ9NZD2 209 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 ZNF223Q9UK11 482 aaPredicted RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 FBXO5Q9UKT4 447 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 V9GYQ6 96 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 KALRNO60229 2985 aa2.8□□□□□ -1.96
SCAF11-210ENST00000547654 TET2Q6N021 2002 aaPredicted RBP2.8□□□□□ -1.96
SCAF11-210ENST00000547654 RALGAPA2Q2PPJ7 1873 aa2.79□□□□□ -1.96
SCAF11-210ENST00000547654 COL12A1Q99715 3063 aa2.79□□□□□ -1.96
SCAF11-210ENST00000547654 A0A1B0GUL6 1792 aa2.79□□□□□ -1.96
SCAF11-210ENST00000547654 SPTAN1Q13813 2472 aaKnown RBP2.79□□□□□ -1.96
SCAF11-210ENST00000547654 FLT4P35916 1363 aa2.79□□□□□ -1.96
SCAF11-210ENST00000547654 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms