RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 OGNP20774 298 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 CXCR1P25024 350 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 PSMB9P28065 219 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ERP29P30040 261 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 KDELR2P33947 212 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 PRSS3P35030 304 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 CA5AP35218 305 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 RPL35P42766 123 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 PFN3P60673 137 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 COPZ1P61923 177 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF846Q147U1 533 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 PMVKQ15126 192 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 TMED2Q15363 201 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 C2orf83Q53S99 150 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 NANOGP8Q6NSW7 305 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 LRRN1Q6UXK5 716 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 MRPL52Q86TS9 123 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 RIMKLAQ8IXN7 391 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 TMEM256Q8N2U0 113 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 STX19Q8N4C7 294 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF738Q8NE65 137 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 OR1M1Q8NGA1 313 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 OR4K17Q8NGC6 315 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 OR5B17Q8NGF7 314 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 OR52P1PQ8NH57 321 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 OR2V1Q8NHB1 315 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF420Q8TAQ5 688 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 STOML3Q8TAV4 291 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 RNF138Q8WVD3 245 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 KLK6Q92876 244 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ZMYND19Q96E35 227 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF488Q96MN9 340 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 IP6K3Q96PC2 410 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 PFDN5Q99471 154 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 TBL1YQ9BQ87 522 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 C7orf50Q9BRJ6 194 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 MED18Q9BUE0 208 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 C1orf50Q9BV19 199 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 MRPL20Q9BYC9 149 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ING2Q9H160 280 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 RPP21Q9H633 154 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 BABAM2Q9NXR7 383 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 VAX2Q9UIW0 290 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 C3orf18Q9UK00 162 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 RAB22AQ9UL26 194 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 TFR2Q9UP52 801 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 WSB1Q9Y6I7 421 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 SEC16AO15027 2179 aa2.81□□□□□ -1.96
SNHG1-217ENST00000541578 ANKHD1Q8IWZ3 2542 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 SPENQ96T58 3664 aaKnown RBP2.81□□□□□ -1.96
SNHG1-217ENST00000541578 POLEQ07864 2286 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 C21orf140B9A014 251 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 G3V2T6 193 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 FABP7O15540 132 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 HCRTO43612 131 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 PLIN3O60664 434 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 POP7O75817 140 aaKnown RBP2.8□□□□□ -1.96
SNHG1-217ENST00000541578 SCO1O75880 301 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 YIF1AO95070 293 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 RCBTB2O95199 551 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 CTDNEP1O95476 244 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 PPBPP02775 128 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 PSKH1P11801 424 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 MAGP20916 626 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 MAGEA3P43357 314 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 RBP2P50120 134 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 GFERP55789 205 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 RAB38P57729 211 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 TAS2R31P59538 309 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 UBE2G2P60604 165 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 RBX1P62877 108 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 PRKCDQ05655 676 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 SRSF6Q13247 344 aaKnown RBP2.8□□□□□ -1.96
SNHG1-217ENST00000541578 MADCAM1Q13477 382 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 TPBGQ13641 420 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 APOFQ13790 326 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF235Q14590 738 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 GUK1Q16774 197 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 DEFB116Q30KQ4 102 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 TMEM236Q5W0B7 351 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 FAM151BQ6UXP7 276 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 CLEC19AQ6UXS0 136 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 CROCCP2Q86T23 111 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 PHF13Q86YI8 300 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-217ENST00000541578 NECAP1Q8NC96 275 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 ST6GALNAC3Q8NDV1 305 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 OR4M1Q8NGD0 313 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 ACTL9Q8TC94 416 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 NEK7Q8TDX7 302 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 S100ZQ8WXG8 99 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 AP3S1Q92572 193 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 CAPZA3Q96KX2 299 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 OR4K3Q96R72 315 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 RBBP8Q99708 897 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 EBNA1BP2Q99848 306 aaKnown RBP2.8□□□□□ -1.96
SNHG1-217ENST00000541578 TBL1XR1Q9BZK7 514 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 FGF23Q9GZV9 251 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-217ENST00000541578 OR52D1Q9H346 318 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 LHX9Q9NQ69 397 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 NIT2Q9NQR4 276 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms