RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
CDH20-202ENST00000536675 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 C17orf98A8MV24 154 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 ESDP10768 282 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 GDF1P27539 372 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 THBS3P49746 956 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 EDDM3BP56851 147 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 MRPS11P82912 194 aaKnown RBP12.13□□□□□ -0.47
CDH20-202ENST00000536675 TRIP6Q15654 476 aaKnown RBP12.13□□□□□ -0.47
CDH20-202ENST00000536675 C21orf62-AS1Q17RA5 79 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 TMPRSS7Q7RTY8 843 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 VAMP8Q9BV40 100 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 LINC00470Q9BZP3 86 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 J3QT63 122 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 CRISP2P16562 243 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 TIMP3P35625 211 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 GFRA1P56159 465 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 SRYQ05066 204 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 EIF4EBP1Q13541 118 aaPredicted RBP12.13□□□□□ -0.47
CDH20-202ENST00000536675 OR10G8Q8NGN5 311 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 OCC1Q8TAD7 63 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
CDH20-202ENST00000536675 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
CDH20-202ENST00000536675 F2Z2F3 143 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
CDH20-202ENST00000536675 TMEM249Q2WGJ8 235 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 TUSC5Q8IXB3 177 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 CIB3Q96Q77 187 aaPredicted RBP12.12□□□□□ -0.47
CDH20-202ENST00000536675 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 RBMXL2O75526 392 aaKnown RBP12.12□□□□□ -0.47
CDH20-202ENST00000536675 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
CDH20-202ENST00000536675 OR2Y1Q8NGV0 311 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 RAB1CQ92928 201 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 WDR83OSQ9Y284 106 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 C15orf62A8K5M9 175 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 EPHA8P29322 1005 aaPredicted RBP12.12□□□□□ -0.47
CDH20-202ENST00000536675 RANP62826 216 aaKnown RBP12.12□□□□□ -0.47
CDH20-202ENST00000536675 ZNF90Q03938 601 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 IL11RAQ14626 422 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 WDR86Q86TI4 376 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 OR5AU1Q8NGC0 362 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 DUSP23Q9BVJ7 150 aa12.12□□□□□ -0.47
CDH20-202ENST00000536675 YLPM1P49750 1951 aaKnown RBP12.11□□□□□ -0.47
CDH20-202ENST00000536675 HCFC1P51610 2035 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 ARL14EPLP0DKL9 152 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 TFPI2P48307 235 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 ZXDAP98168 799 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 SPATA46Q5T0L3 261 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 MCEMP1Q8IX19 187 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 FSCN3Q9NQT6 498 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 CELSR3Q9NYQ7 3312 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 SLC17A3O00476 420 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 RAB29O14966 203 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 CLDN14O95500 239 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 CD1BP29016 333 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 Q0VFX4 171 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 OR5I1Q13606 314 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 OR52L2PQ8NGH6 319 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
CDH20-202ENST00000536675 RNF114Q9Y508 228 aa12.11□□□□□ -0.47
CDH20-202ENST00000536675 FRMD6-AS1P0C7T7 363 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 CCL4P13236 92 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 RAC2P15153 192 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 ARR3P36575 388 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 LINC00205P59089 165 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 BAGE2Q86Y30 109 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 SCCPDHQ8NBX0 429 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 IGHV3-64DA0A0J9YX35 117 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 ERVK11-1P61568 191 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 PLP2Q04941 152 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 PSG7Q13046 419 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 SAMD10Q9BYL1 202 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 IL36BQ9NZH7 164 aa12.1□□□□□ -0.47
CDH20-202ENST00000536675 K7EN84 100 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 NEURL1O76050 574 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 CEBPDP49716 269 aaPredicted RBP12.09□□□□□ -0.47
CDH20-202ENST00000536675 CATR1Q13166 79 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 KRTCAP3Q53RY4 240 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 OR1L6Q8NGR2 347 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 FBXL7Q9UJT9 491 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 PTPRBP23467 1997 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 RRHO14718 337 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 OPN3Q9H1Y3 402 aaPredicted RBP12.09□□□□□ -0.47
CDH20-202ENST00000536675 CHODLQ9H9P2 273 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 MSL2Q9HCI7 577 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 KCNIP1Q9NZI2 227 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 DNAJC13O75165 2243 aa12.09□□□□□ -0.47
CDH20-202ENST00000536675 C12orf77C9JDV5 145 aa12.08□□□□□ -0.47
CDH20-202ENST00000536675 MT-CO3P00414 261 aa12.08□□□□□ -0.47
CDH20-202ENST00000536675 FOLR3P41439 243 aa12.08□□□□□ -0.47
CDH20-202ENST00000536675 GALMQ96C23 342 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms