RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 PPIAL4AQ9Y536 164 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 TIMM9Q9Y5J7 89 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 NCOR1O75376 2440 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 A0A1B0GWJ7 208 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 SCO2A0A1W2PP80 73 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 MARCH11A6NNE9 402 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 C17orf98A8MV24 154 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 DNPH1O43598 174 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 MGST1P10620 155 aaKnown RBP10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 CD1BP29016 333 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 SOX8P57073 446 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 RANP62826 216 aaKnown RBP10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 AESQ08117 197 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 MIC13Q5XKP0 118 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 ABLIM2Q6H8Q1 611 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 TMEM14EPQ6UXP3 125 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 MOB1BQ7L9L4 216 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 OR2J1Q9GZK6 312 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 MED12LQ86YW9 2145 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 DIRC3C9JPN6 131 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 J3QT63 122 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 DAZAP2Q15038 168 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 MRPL14Q6P1L8 145 aaKnown RBP10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 Q6ZN92 141 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 GGNQ86UU5 652 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 MIEN1Q9BRT3 115 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 GNG12Q9UBI6 72 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 ROS1P08922 2347 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 CFAP54Q96N23 3096 aa10.81□□□□□ -0.68
TRAPPC9-208ENST00000520857 UMODP07911 640 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 CD82P27701 267 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 CDKN1AP38936 164 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 OPN3Q9H1Y3 402 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 FCGR3BO75015 233 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 NPPCP23582 126 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 OR8I2Q8N0Y5 310 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 ATOH7Q8N100 152 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 IMMP1LQ96LU5 166 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 BOKQ9UMX3 212 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 POLDIP2Q9Y2S7 368 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 MPC1Q9Y5U8 109 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 PXMP4Q9Y6I8 212 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 FAM90A26D6RGX4 464 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 RPL30P62888 115 aaKnown RBP10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 COL5A1-AS1Q5SY13 56 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 SPSB4Q96A44 273 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 R3HDM4Q96D70 268 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 FOXJ2Q9P0K8 574 aa10.8□□□□□ -0.68
TRAPPC9-208ENST00000520857 TMEM210A6NLX4 147 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 RBFOX2O43251 390 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■■■■ 28.3
TRAPPC9-208ENST00000520857 ZNF253O75346 499 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 ABCA1O95477 2261 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 TFF1P04155 84 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 COL4A2P08572 1712 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 ARR3P36575 388 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 PTTG1IPP53801 180 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 ERVK-16P61578 105 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 PAFAH1B2P68402 229 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 RNF151Q2KHN1 245 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 LINC00696Q6ZRV3 163 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 OR2Y1Q8NGV0 311 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 HIPK2Q9H2X6 1198 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 DNAJC4Q9NNZ3 241 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 B4GALT7Q9UBV7 327 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 RAB7AP51149 207 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 DCAF10Q5QP82 559 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 SP5Q6BEB4 398 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 MRPL54Q6P161 138 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 Q6ZWC4 215 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 OCC1Q8TAD7 63 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 DEPPQ9NTK1 212 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 ELOVL5Q9NYP7 299 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 SFTPCP11686 197 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 EPHA8P29322 1005 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 PDLIM4P50479 330 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 HLA-DRB5Q30154 266 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 LYSMD4Q5XG99 296 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 LPAR2Q9HBW0 351 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 ENY2Q9NPA8 101 aa10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 TIMM8BQ9Y5J9 83 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-208ENST00000520857 TMEM30CPA0ZSE6 113 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 C20orf202A1L168 122 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 CHRNB4P30926 498 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 MMDQ15546 238 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 ACSF3Q4G176 576 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 ZNF826PQ6ZT77 177 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 VKORC1L1Q8N0U8 176 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 HSPB7Q9UBY9 170 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 DKK1O94907 266 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 MT-CO2P00403 227 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 MT-CO3P00414 261 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 IGHEP01854 428 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 TYMSP04818 313 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 CXCL12P48061 93 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 RPL31P62899 125 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms