RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 IFNA21P01568 189 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 CT45A6P0DMU7 189 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 CT45A5P0DMU8 189 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 CT45A7P0DMV0 189 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 UCP1P25874 307 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 CD1BP29016 333 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 SUPT4H1P63272 117 aaKnown RBP8.78□□□□□ -1
PFDN1-204ENST00000512707 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
PFDN1-204ENST00000512707 SP6Q3SY56 376 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 FAM120AOSQ5T036 256 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 RUSC1-AS1Q66K80 236 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 LIN54Q6MZP7 749 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 C12orf45Q8N5I9 185 aaPredicted RBP8.78□□□□□ -1
PFDN1-204ENST00000512707 ZNF383Q8NA42 475 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 UXS1Q8NBZ7 420 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 OR5AN1Q8NGI8 311 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 OR4C13Q8NGP0 309 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 MITD1Q8WV92 249 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 IL22RA2Q969J5 263 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 C5orf30Q96GV9 206 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 TP53RKQ96S44 253 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 GPHA2Q96T91 129 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 MED28Q9H204 178 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 ZFAND3Q9H8U3 227 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 PLEKHA2Q9HB19 425 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 TMEM160Q9NX00 188 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 COMMD9Q9P000 198 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 SHPKQ9UHJ6 478 aa8.78□□□□□ -1
PFDN1-204ENST00000512707 NSD1Q96L73 2696 aaPredicted RBP8.78□□□□□ -1
PFDN1-204ENST00000512707 DUXBA0A1W2PPF3 345 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 A0A1W2PPI3 338 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 H0YJW9 148 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 PROP1O75360 226 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 CRYZL1O95825 349 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 FAM106CPP0CH98 169 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 LPAR6P43657 344 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 AKR1C2P52895 323 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 RPL30P62888 115 aaKnown RBP8.77□□□□□ -1.01
PFDN1-204ENST00000512707 RELBQ01201 579 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 DIAPH2-AS1Q14236 149 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 HES1Q14469 280 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 TMEM187Q14656 261 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 KLF17Q5JT82 389 aaPredicted RBP8.77□□□□□ -1.01
PFDN1-204ENST00000512707 TMEM268Q5VZI3 342 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 CLEC9AQ6UXN8 241 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 OR52B4Q8NGK2 314 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 OSR1Q8TAX0 266 aaPredicted RBP8.77□□□□□ -1.01
PFDN1-204ENST00000512707 DDB2Q92466 427 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 RBPMSQ93062 196 aaKnown RBP8.77□□□□□ -1.01
PFDN1-204ENST00000512707 FLYWCH2Q96CP2 140 aaKnown RBP8.77□□□□□ -1.01
PFDN1-204ENST00000512707 RRNAD1Q96FB5 475 aaKnown RBP8.77□□□□□ -1.01
PFDN1-204ENST00000512707 FBN3Q75N90 2809 aa8.77□□□□□ -1.01
PFDN1-204ENST00000512707 hCG_2014768A0A024R1R8 64 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 A0A0U1RQK1 487 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 BTBD17A6NE02 478 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 SHOXO15266 292 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 CDS2O95674 445 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 FSHBP01225 129 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 NQO2P16083 231 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 LGALS7P47929 136 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 RPS16P62249 146 aaKnown RBP8.76□□□□□ -1.01
PFDN1-204ENST00000512707 KRTAP1-1Q07627 177 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 AANATQ16613 207 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 LRRC75BQ2VPJ9 315 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 ANKRD55Q3KP44 614 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 C1orf229Q6ZS94 237 aaPredicted RBP8.76□□□□□ -1.01
PFDN1-204ENST00000512707 C9orf139Q6ZV77 190 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 FAM219AQ8IW50 185 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 LRTM2Q8N967 370 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 DMBX1Q8NFW5 382 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 OR2T10Q8NGZ9 312 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 GLYATL2Q8WU03 294 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 HARBI1Q96MB7 349 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 TMEM56Q96MV1 263 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 TSNAXQ99598 290 aaKnown RBP8.76□□□□□ -1.01
PFDN1-204ENST00000512707 RNF5Q99942 180 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 CDC42EP3Q9UKI2 254 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 TMED3Q9Y3Q3 217 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 TMEM56-RWDD3S4R434 201 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 WNK2Q9Y3S1 2297 aa8.76□□□□□ -1.01
PFDN1-204ENST00000512707 IGHV3-72A0A0B4J1Y9 119 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 A0A0B4J293 547 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 VGLL3A8MV65 326 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 RAMP3O60896 148 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 S1PR2O95136 353 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 VENTXO95231 258 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 LY6G6DO95868 133 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 MOSP00540 346 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 VDAC1P21796 283 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 DYNLT3P51808 116 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 HABP2Q14520 560 aaPredicted RBP8.75□□□□□ -1.01
PFDN1-204ENST00000512707 VMA21Q3ZAQ7 101 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 TMEM177Q53S58 311 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 THOC7Q6I9Y2 204 aaKnown RBP8.75□□□□□ -1.01
PFDN1-204ENST00000512707 RBMS3Q6XE24 437 aaKnown RBP8.75□□□□□ -1.01
PFDN1-204ENST00000512707 THNSL2Q86YJ6 484 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 VSTM2AQ8TAG5 236 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 R3HDM4Q96D70 268 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 SPIN2AQ99865 258 aa8.75□□□□□ -1.01
PFDN1-204ENST00000512707 SPIN2BQ9BPZ2 258 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms