RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 PPP1R27Q86WC6 154 aa9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 SNAPC3Q92966 411 aa9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 S100A16Q96FQ6 103 aaKnown RBP9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 HARBI1Q96MB7 349 aa9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 AURKAIP1Q9NWT8 199 aaPredicted RBP9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 RBMX2Q9Y388 322 aaKnown RBP9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 A3GALT2U3KPV4 340 aa9.04□□□□□ -0.96
SH3RF1-205ENST00000511421 TNCP24821 2201 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 A0A1W2PN81 502 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 I3L521 148 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 SHOXO15266 292 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 SLC22A5O76082 557 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 CHRNA7P36544 502 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 RPL30P62888 115 aaKnown RBP9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 RUNX1Q01196 453 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 TMEM267Q0VDI3 215 aaPredicted RBP9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 FHL3Q13643 280 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 FXYD3Q14802 87 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 SAMD12Q8N8I0 201 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 LFNGQ8NES3 379 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 ABHD5Q8WTS1 349 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 VSIG4Q9Y279 399 aa9.03□□□□□ -0.96
SH3RF1-205ENST00000511421 CRYZL1O95825 349 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 FCER2P06734 321 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 CBX5P45973 191 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 ARPC4P59998 168 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 KRTAP10-11P60412 298 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 CBX3Q13185 183 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 ACTBL2Q562R1 376 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 UNQ5815/PRO19632Q6UWF5 114 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 CASTOR1Q8WTX7 329 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 NAA50Q9GZZ1 169 aaKnown RBP9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 ANAPC10Q9UM13 185 aa9.02□□□□□ -0.97
SH3RF1-205ENST00000511421 MEIS3P1A6NDR6 274 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 EIF4EP06730 217 aaKnown RBP9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 AADACP22760 399 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 HOXD3P31249 432 aaPredicted RBP9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 FCGR2CP31995 323 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 BRWD1-AS2P59051 145 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 TAS2R20P59543 309 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 GNB1P62873 340 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 CTF1Q16619 201 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 ASPHD1Q5U4P2 390 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 OVCH2Q7RTZ1 564 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 ANKRD13BQ86YJ7 626 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 TEX45Q8NA69 505 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 OR11H1Q8NG94 326 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 OR5M8Q8NGP6 311 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 GRPEL2Q8TAA5 225 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 OSR1Q8TAX0 266 aaPredicted RBP9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 GPR61Q9BZJ8 451 aa9.01□□□□□ -0.97
SH3RF1-205ENST00000511421 FCGR3BO75015 233 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 GABARAPO95166 117 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 RAB25P57735 213 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 UBE2KP61086 200 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 TMEM69Q5SWH9 247 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 PYHIN1Q6K0P9 492 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 KCTD9Q7L273 389 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 OR5AP2Q8NGF4 316 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 OR5B12Q96R08 314 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 HSD17B10Q99714 261 aaKnown RBP9□□□□□ -0.97
SH3RF1-205ENST00000511421 COMMD3Q9UBI1 195 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 CNIH1O95406 144 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 PPYP01298 95 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 NAT1P18440 290 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 ALDH3B2P48448 385 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 CDK10Q15131 360 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 MSMO1Q15800 293 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 PRSS8Q16651 343 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 VMA21Q3ZAQ7 101 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 OR2B11Q5JQS5 317 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 IDO2Q6ZQW0 420 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 MFSD4AQ8N468 514 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 OR1N2Q8NGR9 330 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 MRAPQ8TCY5 172 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 GIMAP1Q8WWP7 306 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 CMTM3Q96MX0 182 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 GPHA2Q96T91 129 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 MRPS26Q9BYN8 205 aaKnown RBP9□□□□□ -0.97
SH3RF1-205ENST00000511421 ALX4Q9H161 411 aaPredicted RBP9□□□□□ -0.97
SH3RF1-205ENST00000511421 CCL28Q9NRJ3 127 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 PRELID3BQ9Y3B1 194 aa9□□□□□ -0.97
SH3RF1-205ENST00000511421 APOA1P02647 267 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 SAA1P0DJI8 122 aaPredicted RBP8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 RORCP51449 518 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 ZNF616Q08AN1 781 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 GPR107Q5VW38 600 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 ZNF66Q6ZN08 573 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 OR5T1Q8NG75 326 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 SECTM1Q8WVN6 248 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 ACOT12Q8WYK0 555 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 RHOVQ96L33 236 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 TMEM68Q96MH6 324 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 MS4A10Q96PG2 267 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms