RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ASPHD2Q6ICH7 369 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 OR4C13Q8NGP0 309 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 C16orf92Q96LL3 132 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 PPIAL4CA0A0B4J2A2 164 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 STAG3L2P0CL84 134 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 PPIAL4GP0DN37 164 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 KLK2P20151 261 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 GLIPR1P48060 266 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 Q6ZT83 130 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 CXorf65A6NEN9 183 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 ERVH48-1M5A8F1 160 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 SYNGR3O43761 229 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 TRGC2P03986 189 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 MAS1LP35410 378 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 ATP5IP56385 69 aaPredicted RBP14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 ABHD12Q8N2K0 398 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 TCF19Q9Y242 345 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 ZNF98A6NK75 572 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 NHLRC3Q5JS37 347 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 UNQ5815/PRO19632Q6UWF5 114 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 ZMAT5Q9UDW3 170 aaKnown RBP14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 A0A0G2JMZ2 1700 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 CD8AP01732 235 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 MDKP21741 143 aaPredicted RBP14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 CRIPAKQ8N1N5 446 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 GPHA2Q96T91 129 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 LOC101059948A0A1B0GTJ6 334 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 RECKO95980 971 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 RND3P61587 244 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 RPL24P83731 157 aaKnown RBP14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 KBTBD11O94819 623 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 PLAUP00749 431 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 DRAM1Q8N682 238 aa14.12□□□□□ -0.15
PCDHA1-203ENST00000504120 SNRPCP09234 159 aaKnown RBP14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 SS18L1O75177 396 aaPredicted RBP14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 PF4V1P10720 104 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 SSTR5P35346 364 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 ZNF146Q15072 292 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 ATP1A1-AS1Q5TC04 95 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 PCSK4Q6UW60 755 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 SPSB4Q96A44 273 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 ELOVL5Q9NYP7 299 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 FOXJ2Q9P0K8 574 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 TMEM56-RWDD3S4R434 201 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 LOC389332A0A1B0GUA5 103 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 IGLV3-19P01714 112 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 TEX29Q8N6K0 151 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 C17orf51A8MQB3 221 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 H0YL77 283 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 PSG9Q00887 426 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 ZNF841Q6ZN19 808 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 TLNRD1Q9H1K6 362 aa14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 ZNF703Q9H7S9 590 aaPredicted RBP14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 DICER1Q9UPY3 1922 aaKnown RBP14.11□□□□□ -0.15
PCDHA1-203ENST00000504120 RNF224P0DH78 156 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 TM2D1Q9BX74 207 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 ZNF883P0CG24 379 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 ARL14EPLP0DKL9 152 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 NUBP1P53384 320 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 IFITM2Q01629 132 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 DNM1P46Q6ZS02 220 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 GUCD1Q96NT3 240 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 HSPB9Q9BQS6 159 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 TRPM7Q96QT4 1865 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 WNT9BO14905 357 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 COX6B1P14854 86 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 RPS20P60866 119 aaKnown RBP14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 NRN1LQ496H8 165 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 TM4SF20Q53R12 229 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 OR51G1Q8NGK1 321 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 SH3BGRL3Q9H299 93 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 CRYBA2P53672 197 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 ZNF738Q8NE65 137 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 PSMG3Q9BT73 122 aaPredicted RBP14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 CLEC7AQ9BXN2 247 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 OR51M1Q9H341 326 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 UNC13CQ8NB66 2214 aa14.1□□□□□ -0.15
PCDHA1-203ENST00000504120 GFRA1P56159 465 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 SYT8Q8NBV8 401 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 RARRES2Q99969 163 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 MRPL32Q9BYC8 188 aaKnown RBP14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 LCTP09848 1927 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 hCG_38984A0A1B0GV85 526 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 GCGP01275 180 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 FCGR2BP31994 310 aaPredicted RBP14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 ZNF708P17019 499 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 RELBQ01201 579 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 LINC00114Q6XXX2 140 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 CABIN1Q9Y6J0 2220 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 IGHV1-69-2A0A0G2JMI3 117 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 SHISA3A0PJX4 238 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 AMY1AP04745 511 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 RFPL3SP0C7P2 107 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 CKS2P33552 79 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 Q5BKY6 102 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 OR1P1Q8NH06 330 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 TP53RKQ96S44 253 aa14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 COL25A1Q9BXS0 654 aaPredicted RBP14.09□□□□□ -0.15
PCDHA1-203ENST00000504120 M0R3E3 92 aa14.08□□□□□ -0.15
PCDHA1-203ENST00000504120 RAMP1O60894 148 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms