RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 IDO2Q6ZQW0 420 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 GVQW1Q8N7I0 195 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.21□□□□□ -1.1
NELFE-213ENST00000494956 OR5T1Q8NG75 326 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 DDB2Q92466 427 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 ARPC1AQ92747 370 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.1
NELFE-213ENST00000494956 HARBI1Q96MB7 349 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 GPHA2Q96T91 129 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 TSNAXQ99598 290 aaKnown RBP8.21□□□□□ -1.1
NELFE-213ENST00000494956 RNF5Q99942 180 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.21□□□□□ -1.1
NELFE-213ENST00000494956 RHBDL2Q9NX52 303 aa8.21□□□□□ -1.1
NELFE-213ENST00000494956 TRAV18A0A075B6X5 111 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 SHOXO15266 292 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 DTYMKP23919 212 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 DUTP33316 252 aaKnown RBP8.2□□□□□ -1.1
NELFE-213ENST00000494956 TPPP2P59282 170 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 LSM3P62310 102 aaKnown RBP8.2□□□□□ -1.1
NELFE-213ENST00000494956 RUNX1Q01196 453 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 OR2B11Q5JQS5 317 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 C9orf66Q5T8R8 295 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 Q6ZS49 121 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 GPR61Q9BZJ8 451 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 ZNF355PQ9NSJ1 428 aa8.2□□□□□ -1.1
NELFE-213ENST00000494956 TNCP24821 2201 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 MEIS3P1A6NDR6 274 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 J3QL48 77 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 OVOL1O14753 267 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 SPDEFO95238 335 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 CNIH1O95406 144 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 CRYZL1O95825 349 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 IGLV2-14P01704 120 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 TRGV3P03979 118 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 LGALS1P09382 135 aaKnown RBP8.19□□□□□ -1.1
NELFE-213ENST00000494956 OR8U8P0C7N1 319 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 GNG2P59768 71 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 RPL30P62888 115 aaKnown RBP8.19□□□□□ -1.1
NELFE-213ENST00000494956 TMEM267Q0VDI3 215 aaPredicted RBP8.19□□□□□ -1.1
NELFE-213ENST00000494956 SRSF7Q16629 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
NELFE-213ENST00000494956 KCTD21Q4G0X4 260 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 AKIRIN2Q53H80 203 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 TMEM177Q53S58 311 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 HAPLN4Q86UW8 402 aa8.19□□□□□ -1.1
NELFE-213ENST00000494956 LINC01619G3V211 115 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 FCGR3BO75015 233 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 RBMXL2O75526 392 aaKnown RBP8.18□□□□□ -1.1
NELFE-213ENST00000494956 TUSC2O75896 110 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 DIRAS3O95661 229 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 LGALS7P47929 136 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 CD69Q07108 199 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 TNXAQ16473 311 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 C10orf55Q5SWW7 151 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 VKORC1L1Q8N0U8 176 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 RHOVQ96L33 236 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 DCSTAMPQ9H295 470 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 ANXA10Q9UJ72 324 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 ADAM30Q9UKF2 790 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 OR2W1Q9Y3N9 320 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 COL7A1Q02388 2944 aa8.18□□□□□ -1.1
NELFE-213ENST00000494956 ANKRD34BA5PLL1 514 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 MSGN1A6NI15 193 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 TNFSF12O43508 249 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 SAP30O75446 220 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 LY86O95711 162 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 HLA-DQB1P01920 261 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 PRH1P02810 166 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 SAA1P0DJI8 122 aaPredicted RBP8.17□□□□□ -1.1
NELFE-213ENST00000494956 RPS19P39019 145 aaKnown RBP8.17□□□□□ -1.1
NELFE-213ENST00000494956 BRWD1-AS2P59051 145 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 ARL6IP1Q15041 203 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 CNIH2Q6PI25 160 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 ZNF645Q8N7E2 425 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 TCTEX1D1Q8N7M0 179 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 POC5Q8NA72 575 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 YIPF6Q96EC8 236 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 ASCL2Q99929 193 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 SPATA2Q9UM82 520 aa8.17□□□□□ -1.1
NELFE-213ENST00000494956 RBMX2Q9Y388 322 aaKnown RBP8.17□□□□□ -1.1
NELFE-213ENST00000494956 LSM4Q9Y4Z0 139 aaKnown RBP8.17□□□□□ -1.1
NELFE-213ENST00000494956 AIREO43918 545 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 RAMP3O60896 148 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
NELFE-213ENST00000494956 RRASP10301 218 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 AADACP22760 399 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 UBE2KP61086 200 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 PITPNAQ00169 270 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 CBX3Q13185 183 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 EIF4EBP1Q13541 118 aaPredicted RBP8.16□□□□□ -1.1
NELFE-213ENST00000494956 PRSS8Q16651 343 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 PYHIN1Q6K0P9 492 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 C19orf35Q6ZS72 473 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 KCTD9Q7L273 389 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 BEST4Q8NFU0 473 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 TSPAN14Q8NG11 270 aa8.16□□□□□ -1.1
NELFE-213ENST00000494956 SRSF12Q8WXF0 261 aaKnown RBP8.16□□□□□ -1.1
NELFE-213ENST00000494956 ACOT12Q8WYK0 555 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms