RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 ZNF705BP0CI00 300 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BOP23527 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 F2RP25116 425 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BBP33778 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 CEACAM6P40199 344 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 SULT1A2P50226 295 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 DVL1P1P54792 670 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BDP58876 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BCP62807 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 EWSR1Q01844 656 aaKnown RBP eCLIP5.87□□□□□ -1.476e-7■■■□□ 16.8
HERC4-211ENST00000492996 AESQ08117 197 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST2H2BEQ16778 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 OR2C3Q8N628 320 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BHQ93079 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 PLPPR2Q96GM1 343 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 SMIM8Q96KF7 97 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BNQ99877 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BMQ99879 126 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 TUBG2Q9NRH3 451 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 POLDIP2Q9Y2S7 368 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 POLR3KQ9Y2Y1 108 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 POMT1Q9Y6A1 747 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 ATMQ13315 3056 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 CHD3Q12873 2000 aaKnown RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 ZNF727A8MUV8 499 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 SH2D1BO14796 132 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 TMEM50AO95807 157 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 CAMLGP49069 296 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 TMEM182Q6ZP80 229 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 Q6ZS49 121 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 MRPL41Q8IXM3 137 aaKnown RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 OR10V1Q8NGI7 309 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 RFESDQ8TAC1 157 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 TMEM56Q96MV1 263 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 TUBA4BQ9H853 241 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 TMEM56-RWDD3S4R434 201 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 TLN1Q9Y490 2541 aaKnown RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 CHST1O43916 411 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 HAND1O96004 215 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 GAPDHP04406 335 aaKnown RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 PGA5P0DJD9 388 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 GZMBP10144 247 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 COX5AP20674 150 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 VDAC1P21796 283 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 UCP1P25874 307 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 P2RY1P47900 373 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 UQCRFS1P47985 274 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 SRPXP78539 464 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 JOSD1Q15040 202 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 LTC4SQ16873 150 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 MIDNQ504T8 468 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 H1FOOQ8IZA3 346 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 OR1L6Q8NGR2 347 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 SAT2Q96F10 170 aaPredicted RBP5.87□□□□□ -1.47
HERC4-211ENST00000492996 SPIN2AQ99865 258 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 SPIN2BQ9BPZ2 258 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 LPAR2Q9HBW0 351 aa5.87□□□□□ -1.47
HERC4-211ENST00000492996 IQCF6A8MYZ5 107 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 NDUFS8O00217 210 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 TRGC1P0CF51 173 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 S100GP29377 79 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 GABRA2P47869 451 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 ZNF83P51522 516 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 ERVK11-1P61568 191 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 GPR157Q5UAW9 335 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 ZNF343Q6P1L6 599 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 OR5C1Q8NGR4 320 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 OR1L1Q8NH94 360 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 FAM213BQ8TBF2 198 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 MALSU1Q96EH3 234 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 HIST1H2BLQ99880 126 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 ABHD14AQ9BUJ0 271 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 TAAR3PQ9P1P4 343 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 METRNQ9UJH8 293 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 PROCRQ9UNN8 238 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 IGHV3-43A0A0B4J1X8 118 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 IGHV3-43DP0DP04 118 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 IAPPP10997 89 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 IRF2P14316 349 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 GCH1P30793 250 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 COMPP49747 757 aaPredicted RBP5.86□□□□□ -1.47
HERC4-211ENST00000492996 ERVFC1-1P60608 527 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 RND3P61587 244 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 RUNX1Q01196 453 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 PAX5Q02548 391 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 ATP6V1FQ16864 119 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 NMSQ5H8A3 153 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 ZNF497Q6ZNH5 498 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 Q6ZR03 302 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 Q6ZRM9 215 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 LINC00596Q86U02 117 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 TMEM252Q8N6L7 170 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 OR8G5Q8NG78 346 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 MRGPRDQ8TDS7 321 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 TMEM171Q8WVE6 324 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 CORO2AQ92828 525 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 GPR146Q96CH1 333 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 STARD4Q96DR4 205 aa5.86□□□□□ -1.47
HERC4-211ENST00000492996 RCC1LQ96I51 464 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms