RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TLE4Q04727 773 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 HAGHQ16775 308 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 HFEQ30201 348 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 DPPA3Q6W0C5 159 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 SSX9Q7RTT3 188 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 ZNF665Q9H7R5 613 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 RPRMQ9NS64 109 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 GFOD1Q9NXC2 390 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 SPTA1P02549 2419 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 TRGV10A0A0A0MS01 117 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 BTBD17A6NE02 478 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 C17orf100A8MU93 164 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 HPRT1P00492 218 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 OR2B8PP59922 312 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 RPS16P62249 146 aaKnown RBP10.74□□□□□ -0.69
SEC13-216ENST00000479868 CT45A1Q5HYN5 189 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 TEX36Q5VZQ5 186 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 VKORC1L1Q8N0U8 176 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 CT45A3Q8NHU0 189 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 FAM216AQ8WUB2 273 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 WFIKKN1Q96NZ8 548 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 PSMG3Q9BT73 122 aaPredicted RBP10.74□□□□□ -0.69
SEC13-216ENST00000479868 QTRT1Q9BXR0 403 aaKnown RBP10.74□□□□□ -0.69
SEC13-216ENST00000479868 HIPK2Q9H2X6 1198 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 MSRB2Q9Y3D2 182 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 PMS2P5A8MQ11 134 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 OR8U8P0C7N1 319 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 IRF2P14316 349 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 HNF4GQ14541 408 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 C20orf24Q9BUV8 137 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 ZZEF1O43149 2961 aa10.74□□□□□ -0.69
SEC13-216ENST00000479868 TET2Q6N021 2002 aaPredicted RBP10.74□□□□□ -0.69
SEC13-216ENST00000479868 CEBPZOSA8MTT3 80 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 MMP23AO75900 390 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 AWAT1Q58HT5 328 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 SSX7Q7RTT5 188 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 RND1Q92730 232 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 TAF15Q92804 592 aaKnown RBP eCLIP10.73□□□□□ -0.69
SEC13-216ENST00000479868 PARD6GQ9BYG4 376 aaPredicted RBP10.73□□□□□ -0.69
SEC13-216ENST00000479868 SAA2-SAA4A0A096LPE2 208 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 TMPRSS2O15393 492 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 SAA2P0DJI9 122 aaPredicted RBP10.73□□□□□ -0.69
SEC13-216ENST00000479868 TNFRSF1AP19438 455 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 CLDND2Q8NHS1 167 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 DDB2Q92466 427 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 RBMXL1Q96E39 390 aaKnown RBP10.73□□□□□ -0.69
SEC13-216ENST00000479868 RPS10P5Q9NQ39 176 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 NDRG3Q9UGV2 375 aa10.73□□□□□ -0.69
SEC13-216ENST00000479868 SPTBN4Q9H254 2564 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 RBFOX2O43251 390 aaKnown RBP eCLIP10.72□□□□□ -0.69
SEC13-216ENST00000479868 SNRNP70P08621 437 aaKnown RBP10.72□□□□□ -0.69
SEC13-216ENST00000479868 FBP1P09467 338 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 PLA2G5P39877 138 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 RAB7AP51149 207 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 SERF2P84101 59 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 ICAM4Q14773 271 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 CIB3Q96Q77 187 aaPredicted RBP10.72□□□□□ -0.69
SEC13-216ENST00000479868 S1PR3Q99500 378 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 ZNF251Q9BRH9 671 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 SMDT1Q9H4I9 107 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 PRELID3BQ9Y3B1 194 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 TRAV3A0A0B4J244 114 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 TRAV1-1A0A0B4J248 108 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 M0R036 132 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 ITGB1BP1O14713 200 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 SCAF4O95104 1147 aaKnown RBP10.72□□□□□ -0.69
SEC13-216ENST00000479868 ELLP55199 621 aaPredicted RBP10.72□□□□□ -0.69
SEC13-216ENST00000479868 TLE1Q04724 770 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 RBPJQ06330 500 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 PRAMEF5Q5TYX0 476 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 ZNF439Q8NDP4 499 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 OR10P1Q8NGE3 313 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 RCC1LQ96I51 464 aaKnown RBP10.72□□□□□ -0.69
SEC13-216ENST00000479868 DIRC2Q96SL1 478 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 SAP30LQ9HAJ7 183 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 RAB9BQ9NP90 201 aa10.72□□□□□ -0.69
SEC13-216ENST00000479868 C7orf77A4D0Y5 90 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 IFNA17P01571 189 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 HBE1P02100 147 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 S100A6P06703 90 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 SRP19P09132 144 aaKnown RBP10.71□□□□□ -0.69
SEC13-216ENST00000479868 GNG10P50151 68 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 TMPRSS3P57727 454 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 ERVFRD-1P60508 538 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 NHLH1Q02575 133 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 AARDQ4LEZ3 155 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 SOHLH1Q5JUK2 328 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 LCN15Q6UWW0 184 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 RXFP4Q8TDU9 374 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 NEUROG1Q92886 237 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 CLCC1Q96S66 551 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 IDI2-AS1Q9NZ38 188 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 GAB2Q9UQC2 676 aa10.71□□□□□ -0.69
SEC13-216ENST00000479868 ZNF729A6NN14 1252 aaPredicted RBP10.7□□□□□ -0.7
SEC13-216ENST00000479868 SHISA9B4DS77 424 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 H7C2Y5 167 aa10.7□□□□□ -0.7
SEC13-216ENST00000479868 FCN3O75636 299 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 1216.5 ms