RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZNF404Q494X3 552 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 UBE2NLQ5JXB2 153 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 ASPHD2Q6ICH7 369 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 CLEC2AQ6UVW9 174 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 WDR82Q6UXN9 313 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 ACP7Q6ZNF0 438 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 OR2W3Q7Z3T1 314 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 WDR86Q86TI4 376 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 CALHM1Q8IU99 346 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 FAM58AQ8N1B3 248 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 BATF2Q8N1L9 274 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 OSR2Q8N2R0 312 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 DEFB108BQ8NET1 73 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 OR51D1Q8NGF3 324 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 OR4D6Q8NGJ1 314 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 OR51T1Q8NGJ9 327 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 LGALS14Q8TCE9 139 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 DYNC2LI1Q8TCX1 351 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 NEK7Q8TDX7 302 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 TMEM37Q8WXS4 190 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 NRGNQ92686 78 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 RAB1CQ92928 201 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 MRPS24Q96EL2 167 aaKnown RBP2.84□□□□□ -1.95
UBR3-209ENST00000477461 S100A16Q96FQ6 103 aaKnown RBP2.84□□□□□ -1.95
UBR3-209ENST00000477461 GAL3ST1Q99999 423 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 PAXXQ9BUH6 204 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 TMEM59Q9BXS4 323 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 SELENOIQ9C0D9 397 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 FGF23Q9GZV9 251 aaPredicted RBP2.84□□□□□ -1.95
UBR3-209ENST00000477461 TLNRD1Q9H1K6 362 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 ATG5Q9H1Y0 275 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 BANF2Q9H503 90 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 DIABLOQ9NR28 239 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 TMEM106BQ9NUM4 274 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 RASL12Q9NYN1 266 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 TREM2Q9NZC2 230 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 IL36GQ9NZH8 169 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 COMMD3Q9UBI1 195 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 RAB22AQ9UL26 194 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 PPIAL4AQ9Y536 164 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 PEX16Q9Y5Y5 336 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 NPTNQ9Y639 398 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 DOCK11Q5JSL3 2073 aa2.84□□□□□ -1.95
UBR3-209ENST00000477461 LOC400499M0QZD8 3231 aa2.84□□□□□ -1.96
UBR3-209ENST00000477461 ATMQ13315 3056 aa2.84□□□□□ -1.96
UBR3-209ENST00000477461 FASNP49327 2511 aaKnown RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 LRRK2Q5S007 2527 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 CFAP46Q8IYW2 2715 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 IGHV3OR15-7A0A075B7D8 119 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 IGKV1-12A0A0C4DH73 117 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 FUOMA2VDF0 154 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 OR2AT4A6NND4 320 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 TMEM14DPA8MWL7 114 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 LYNX1G3V0Z9 82 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 H0Y9J4 135 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 NDUFS8O00217 210 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 SIRPB1O00241 398 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 DEGS1O15121 323 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 NDUFA2O43678 99 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 HPGDSO60760 199 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 NOS1APO75052 506 aaPredicted RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 TSC22D2O75157 780 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 CLPXO76031 633 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 OR7C1O76099 320 aaPredicted RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 LY6HO94772 140 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 HAND1O96004 215 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 PAHP00439 452 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 LHBP01229 141 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 IGKV1D-12P01611 117 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 APOA1P02647 267 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 LYNX1P0DP58 116 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 CD37P11049 281 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 MUC1P15941 1255 aaPredicted RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 GABRR1P24046 479 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 COL8A2P25067 703 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 BLVRBP30043 206 aaPredicted RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 CFHR2P36980 270 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 MDH2P40926 338 aaKnown RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 PMELP40967 661 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 NPBWR2P48146 333 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 MEOX2P50222 304 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 RBM11P57052 281 aaKnown RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 TMEM33P57088 247 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 FGF12P61328 243 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 PAX2Q02962 417 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 ARL6IP1Q15041 203 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 TAF9Q16594 264 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 MPV17LQ2QL34 196 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 DEFB113Q30KQ7 82 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 PAN3Q58A45 887 aaKnown RBP2.83□□□□□ -1.96
UBR3-209ENST00000477461 SPRNQ5BIV9 151 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 SPIN3Q5JUX0 258 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 AVPI1Q5T686 147 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 ELP2Q6IA86 826 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 OR10K2Q6IF99 312 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 ETFRF1Q6IPR1 90 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 RAB12Q6IQ22 244 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 ASCL4Q6XD76 172 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 SLC36A1Q7Z2H8 476 aa2.83□□□□□ -1.96
UBR3-209ENST00000477461 LINC00596Q86U02 117 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms