RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TMEM177Q53S58 311 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 YIF1BQ5BJH7 314 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 OR2G6Q5TZ20 316 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 LGALS9CQ6DKI2 356 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 LINC00336Q6ZUF6 198 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 SLC16A13Q7RTY0 426 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 C6orf201Q7Z4U5 140 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 LYG2Q86SG7 212 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 CDH26Q8IXH8 852 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 CLRN3Q8NCR9 226 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 ADAD2Q8NCV1 583 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 KCNG3Q8TAE7 436 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 DYNLRB2Q8TF09 96 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 PTX4Q96A99 478 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 PGLYRP3Q96LB9 341 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 Q96MT0 163 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 C11orf54Q9H0W9 315 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 FGF20Q9NP95 211 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 AKIP1Q9NQ31 210 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 COA4Q9NYJ1 87 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 OR1A1Q9P1Q5 309 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 TP53TG1Q9Y2A0 90 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 ORC6Q9Y5N6 252 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 U3KQE9 123 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 DNAH5Q8TE73 4624 aa3.83□□□□□ -1.8
SNRNP40-204ENST00000474025 LOC102724200A0A096LPH7 203 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 TRBV9A0A0B4J1U6 114 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 A0A1W2PPK0 400 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 TMEM213A2RRL7 107 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 FAM223BA6NKX1 122 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 DBX1A6NMT0 343 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 PRH1P02810 166 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 OR9G9P0C7N8 305 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 BMI1P35226 326 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 CEACAM6P40199 344 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 RPS27AP62979 156 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 HLA-DRB3P79483 266 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF45Q02386 682 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 C1orf146Q5VVC0 180 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 OR10K2Q6IF99 312 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 MZT2AQ6P582 158 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 Q6ZWC4 215 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 MOB1BQ7L9L4 216 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 FAM223AQ8IWN6 122 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 TMEM61Q8N0U2 210 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 OR52B4Q8NGK2 314 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 APH1BQ8WW43 257 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 CACNG8Q8WXS5 425 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 HARBI1Q96MB7 349 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 NEDD4LQ96PU5 975 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 DERL3Q96Q80 235 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 SLC29A1Q99808 456 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 UQCC2Q9BRT2 126 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 FAAP24Q9BTP7 215 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 SLC35D1Q9NTN3 355 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 TECRQ9NZ01 308 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 RPL36Q9Y3U8 105 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 DMRT1Q9Y5R6 373 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 SELENOKQ9Y6D0 94 aa3.82□□□□□ -1.8
SNRNP40-204ENST00000474025 A0A0A6YYD4 124 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 TRBV6-6A0A0A6YYG2 114 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 IGKV1-6A0A0C4DH72 117 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 SRRM4A7MD48 611 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 PPP5D1E7EU14 171 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 M0R1X1 148 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 LGALS9O00182 355 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 DYNC1I1O14576 645 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 SPRY2O43597 315 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 GGCTO75223 188 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 WBP4O75554 376 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 TUSC2O75896 110 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 HLA-AP01891 365 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 HNRNPCP07910 306 aaKnown RBP eCLIP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 CBLN1P23435 193 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ZBTB25P24278 435 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 DCKP27707 260 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 HTR2CP28335 458 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ATP5G2Q06055 141 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 UNC119Q13432 240 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ODF1Q14990 250 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 SMN1Q16637 294 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 PRSS8Q16651 343 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 DEFB135Q30KP9 77 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 C15orf32Q32M92 178 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF57Q68EA5 555 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 MZT2BQ6NZ67 158 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 TMPRSS11AQ6ZMR5 421 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 CBR4Q8N4T8 237 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 NKAIN3Q8N8D7 197 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ZFP41Q8N8Y5 198 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 NECAP1Q8NC96 275 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 ZNF485Q8NCK3 441 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 SETD6Q8TBK2 473 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 PHLDA1Q8WV24 401 aaPredicted RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 SRSF12Q8WXF0 261 aaKnown RBP3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 C5orf30Q96GV9 206 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 PHB2Q99623 299 aa3.81□□□□□ -1.8
SNRNP40-204ENST00000474025 NICN1Q9BSH3 213 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms