RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 RBFOX2O43251 390 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 RAMP3O60896 148 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 CRYZL1O95825 349 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 IFNA2P01563 188 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 IGKV1D-33P01593 117 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 IGKV1-33P01594 117 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 HLA-AP01891 365 aaKnown RBP10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 ANXA3P12429 323 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 RAG2P55895 527 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 DHRS2Q13268 280 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 HES1Q14469 280 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 SLC9A3R2Q15599 337 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 AANATQ16613 207 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 SP6Q3SY56 376 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 C4orf46Q504U0 113 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 FBLN7Q53RD9 439 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 DHRS7BQ6IAN0 325 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 Q6YL49 198 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 MINDY2Q8NBR6 621 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 GALNT14Q96FL9 552 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 PRDM13Q9H4Q3 707 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 KCNIP3Q9Y2W7 256 aa10.07□□□□□ -0.8
TRAPPC12-217ENST00000473348 PLXNB1O43157 2135 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 SFT2D2O95562 160 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 DHFRP00374 187 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 MOSP00540 346 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 IGHV4-59P01825 116 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 IGKV1-16P04430 117 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 SERPINE2P07093 398 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 FAM157CP0CG43 387 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 FAM106CPP0CH98 169 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 TMEM11P17152 192 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 UCP1P25874 307 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 LPAR6P43657 344 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 ZNF585BQ52M93 769 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 RBMS3Q6XE24 437 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 LYG2Q86SG7 212 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 OR52B4Q8NGK2 314 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 OR2T10Q8NGZ9 312 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 PIFOQ8TCI5 191 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 CD300LFQ8TDQ1 290 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 CASTOR1Q8WTX7 329 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 EAF1Q96JC9 268 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 HARBI1Q96MB7 349 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 SEC22CQ9BRL7 303 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 ALX4Q9H161 411 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 FAM212BQ9NTI7 297 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 PRR13Q9NZ81 148 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 TCF19Q9Y242 345 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 TNCP24821 2201 aa10.06□□□□□ -0.8
TRAPPC12-217ENST00000473348 C9orf170A2RU37 121 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 BTBD17A6NE02 478 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 SHOXO15266 292 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 HOXA3O43365 443 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 PRAF2O60831 178 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 CRLF1O75462 422 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 S1PR2O95136 353 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 HPRT1P00492 218 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 IL5P05113 134 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 IER3P46695 156 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 EBI3Q14213 229 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 HNF4GQ14541 408 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 TMEM187Q14656 261 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 LY6EQ16553 131 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 TMEM177Q53S58 311 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 THNSL2Q86YJ6 484 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 OR5R1Q8NH85 324 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 GLYATL2Q8WU03 294 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 SSMEM1Q8WWF3 244 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 TMEM222Q9H0R3 208 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 PLEKHA2Q9HB19 425 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
TRAPPC12-217ENST00000473348 A0A0B4J293 547 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 A6NDX4 124 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 DUS4LO95620 317 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 RPA2P15927 270 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 RPS16P62249 146 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 SRPXP78539 464 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 ANKRD55Q3KP44 614 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 TMEM219Q86XT9 240 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 Q8N6K4 173 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 ZNF431Q8TF32 576 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 R3HDM4Q96D70 268 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 RITA1Q96K30 269 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 TSNAXQ99598 290 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 SLC25A33Q9BSK2 321 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 GPN1Q9HCN4 374 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 TNFRSF19Q9NS68 423 aa10.04□□□□□ -0.8
TRAPPC12-217ENST00000473348 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms