RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 LRRC10Q5BKY1 277 aa17.05■□□□□ 0.32
USP39-203ENST00000409470 LYPD2Q6UXB3 125 aa17.05■□□□□ 0.32
USP39-203ENST00000409470 C1orf229Q6ZS94 237 aaPredicted RBP17.05■□□□□ 0.32
USP39-203ENST00000409470 SSX9Q7RTT3 188 aa17.05■□□□□ 0.32
USP39-203ENST00000409470 LILRB2Q8N423 598 aa17.05■□□□□ 0.32
USP39-203ENST00000409470 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.05■□□□□ 0.32
USP39-203ENST00000409470 ZNF439Q8NDP4 499 aa17.05■□□□□ 0.32
USP39-203ENST00000409470 MED19A0JLT2 244 aaPredicted RBP17.04■□□□□ 0.32
USP39-203ENST00000409470 UMAD1C9J7I0 102 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 ARL16Q0P5N6 197 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 DTD1Q8TEA8 209 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 YLPM1P49750 1951 aaKnown RBP17.04■□□□□ 0.32
USP39-203ENST00000409470 NBASA2RRP1 2371 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 ARFGEF3Q5TH69 2177 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 HFEQ30201 348 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 ZNF672Q499Z4 452 aaPredicted RBP17.04■□□□□ 0.32
USP39-203ENST00000409470 HAPLN4Q86UW8 402 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 SUN5Q8TC36 379 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 SCGB1C1Q8TD33 95 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 UQCC1Q9NVA1 299 aa17.04■□□□□ 0.32
USP39-203ENST00000409470 KALRNO60229 2985 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 CEBPZOSA8MTT3 80 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 F8W036 122 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 RNASEK-C17orf49H0YIS7 233 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 TNFRSF13BO14836 293 aaPredicted RBP17.03■□□□□ 0.32
USP39-203ENST00000409470 ZG16O60844 167 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 OR9G9P0C7N8 305 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 THBS3P49746 956 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 THNSL2Q86YJ6 484 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 ZNF525Q8N782 197 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 OR4S2Q8NH73 311 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 DDB2Q92466 427 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 ZDHHC16Q969W1 377 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 ZNF714Q96N38 554 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 FCN3O75636 299 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 NQO2P16083 231 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 CCL3L1P16619 93 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 OR2B8PP59922 312 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 SPINK9Q5DT21 86 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 TMEM200BQ69YZ2 307 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 OR8G2PQ6IF36 304 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 TMEM14EPQ6UXP3 125 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 VKORC1L1Q8N0U8 176 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 CIB3Q96Q77 187 aaPredicted RBP17.03■□□□□ 0.32
USP39-203ENST00000409470 ZNF251Q9BRH9 671 aa17.03■□□□□ 0.32
USP39-203ENST00000409470 QTRT1Q9BXR0 403 aaKnown RBP17.03■□□□□ 0.32
USP39-203ENST00000409470 COL6A6A6NMZ7 2263 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 DVL1O14640 695 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 DAOP14920 347 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 ERVFRD-1P60508 538 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 AKR1C8PQ5T2L2 129 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 SLC25A48Q6ZT89 311 aaKnown RBP17.02■□□□□ 0.32
USP39-203ENST00000409470 COMMD1Q8N668 190 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 OR10A7Q8NGE5 316 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 OR4A16Q8NH70 328 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 ADTRPQ96IZ2 230 aa17.02■□□□□ 0.32
USP39-203ENST00000409470 ANKHD1Q8IWZ3 2542 aaKnown RBP17.02■□□□□ 0.31
USP39-203ENST00000409470 FAM90A9PA6NNJ1 464 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 IFNA17P01571 189 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 SLC38A11Q08AI6 406 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 OR4C12Q96R67 309 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 CTSZQ9UBR2 303 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 FBXO7Q9Y3I1 522 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 ADCYAP1P18509 176 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 M6PRP20645 277 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 SNCAP37840 140 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 DVL1P1P54792 670 aaPredicted RBP17.01■□□□□ 0.31
USP39-203ENST00000409470 BTN1A1Q13410 526 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 HEPN1Q6WQI6 88 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 KAAG1Q9UBP8 84 aa17.01■□□□□ 0.31
USP39-203ENST00000409470 A0A1B0GV50 99 aa17■□□□□ 0.31
USP39-203ENST00000409470 NDUFA2O43678 99 aa17■□□□□ 0.31
USP39-203ENST00000409470 ATRAIDQ6UW56 229 aa17■□□□□ 0.31
USP39-203ENST00000409470 ZNF383Q8NA42 475 aa17■□□□□ 0.31
USP39-203ENST00000409470 TMEM140Q9NV12 185 aa17■□□□□ 0.31
USP39-203ENST00000409470 CD5P06127 495 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 PIEZO1Q92508 2521 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 HCFC1P51610 2035 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 LYNX1G3V0Z9 82 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 LYNX1P0DP58 116 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 RSG1Q9BU20 258 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 ZNRD1Q9P1U0 126 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 RELNP78509 3460 aa16.99■□□□□ 0.31
USP39-203ENST00000409470 LOXP28300 417 aaPredicted RBP16.98■□□□□ 0.31
USP39-203ENST00000409470 LRRC75BQ2VPJ9 315 aa16.98■□□□□ 0.31
USP39-203ENST00000409470 SVBPQ8N300 66 aa16.98■□□□□ 0.31
USP39-203ENST00000409470 TMEM204Q9BSN7 226 aa16.98■□□□□ 0.31
USP39-203ENST00000409470 SEC11CQ9BY50 192 aa16.98■□□□□ 0.31
USP39-203ENST00000409470 DOCK11Q5JSL3 2073 aa16.98■□□□□ 0.31
USP39-203ENST00000409470 UBE2L5PA0A1B0GUS4 154 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 SFTA3P0C7M3 94 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 TFF3Q07654 80 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 GUK1Q16774 197 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 LFNGQ8NES3 379 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 RAB39BQ96DA2 213 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 CLCC1Q96S66 551 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 EIF5A2Q9GZV4 153 aaKnown RBP16.97■□□□□ 0.31
USP39-203ENST00000409470 H2AFB1P0C5Y9 115 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 COL8A2P25067 703 aa16.97■□□□□ 0.31
USP39-203ENST00000409470 SPCS3P61009 180 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms