RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGHV3-43DP0DP04 118 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SRP14P37108 136 aaKnown RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SSR4P51571 173 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 TPPP2P59282 170 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CCL7P80098 99 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RPS19BP1Q86WX3 136 aaKnown RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CXorf67Q86X51 503 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 FAM58AQ8N1B3 248 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 TPRX1Q8N7U7 411 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CPT1CQ8TCG5 803 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 PXMP4Q9Y6I8 212 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 ICE1Q9Y2F5 2266 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 KIR2DL5BA0A0G2JN68 375 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 KIR2DL5BA0A0G2JPC4 375 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SCO2A0A1W2PP80 73 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SH2D1BO14796 132 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 MRPL33O75394 65 aaKnown RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 NTF3P20783 257 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RAB7AP51149 207 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SOX8P57073 446 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RAC3P60763 192 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 PCBD1P61457 104 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 MSMO1Q15800 293 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 KIR2DL5AQ8N109 375 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CADM4Q8NFZ8 388 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 OR5AU1Q8NGC0 362 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 AGMATQ9BSE5 352 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 NPCDR1Q9BY65 106 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 OR2D2Q9H210 308 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RIMS4Q9H426 269 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 RNF114Q9Y508 228 aa8.31□□□□□ -1.08
PTCHD4-202ENST00000398738 CHRNB4P30926 498 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 RPL15P61313 204 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 TMEM183BQ1AE95 376 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 HLA-DRB5Q30154 266 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ETFRF1Q6IPR1 90 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 Q6ZSR3 168 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 FOXL2NBQ6ZUU3 175 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 KMT5CQ86Y97 462 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 SSMEM1Q8WWF3 244 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 PROK2Q9HC23 129 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 TRBV20OR9-2A0A075B6H5 130 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 A0A1W2PQM1 296 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ODAMA1E959 279 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 H3BS24 57 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 S1PR2O95136 353 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 IGLV2-14P01704 120 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 RPL30P62888 115 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ODF1Q14990 250 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 TMEM147Q9BVK8 224 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 LIN7CQ9NUP9 197 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
PTCHD4-202ENST00000398738 IGLV3-12A0A075B6K2 115 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ZNF503-AS2A6NEH8 195 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 CBR3O75828 277 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 IGHEP01854 428 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 GRPP07492 148 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 GDF1P27539 372 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 MRPS11P82912 194 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 CEACAM21Q3KPI0 293 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 FAM19A2Q8N3H0 131 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SIGLECL1Q8N7X8 197 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OCC1Q8TAD7 63 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ELOVL5Q9NYP7 299 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 RP1L1Q8IWN7 2480 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 M0QZK8 103 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OTX2P32243 289 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 AMTP48728 403 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 HINT1P49773 126 aaPredicted RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 TPTE2P1Q5T6R2 138 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 Q6ZN92 141 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OR52L2PQ8NGH6 319 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OR10G8Q8NGN5 311 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 OR1L6Q8NGR2 347 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 TP53TG3Q9ULZ0 132 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ZNF716A6NP11 495 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ANKRD30BLA7E2S9 258 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 C17orf98A8MV24 154 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 DIRC3C9JPN6 131 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 TNFSF13O75888 250 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 P04436 131 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ARL14EPLP0DKL9 152 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SUMO1P63165 101 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 PCOLCEQ15113 449 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 KRTCAP3Q53RY4 240 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 SYT13Q7L8C5 426 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 RNF138Q8WVD3 245 aa8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 LSM10Q969L4 123 aaKnown RBP8.29□□□□□ -1.08
PTCHD4-202ENST00000398738 ACTL6BO94805 426 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 SYNGR4O95473 234 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 WNT2P09544 360 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 FKBP2P26885 142 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 RPP30P78346 268 aaKnown RBP8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 HTD2P86397 168 aa8.28□□□□□ -1.08
PTCHD4-202ENST00000398738 FXYD3Q14802 87 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms