RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 A6NJY4 79 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 SAC3D1A6NKF1 404 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 M0R1X1 148 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 ALPLP05186 524 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 OR2C3Q8N628 320 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 STPG3Q8N7X2 389 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 TEX45Q8NA69 505 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 CCDC197Q8NCU1 140 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 SRSF12Q8WXF0 261 aaKnown RBP6.23□□□□□ -1.41
SCFD1-202ENST00000396629 HARBI1Q96MB7 349 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 Q96MT0 163 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 UQCC2Q9BRT2 126 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 CHMP1AQ9HD42 196 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-202ENST00000396629 APLNQ9ULZ1 77 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 MPPED1O15442 326 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 C8orf88P0DMB2 117 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 ETV1P50549 477 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 HLA-DRB3P79483 266 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
SCFD1-202ENST00000396629 TNXAQ16473 311 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 PRSS8Q16651 343 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 C15orf32Q32M92 178 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 ZIK1Q3SY52 487 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-202ENST00000396629 YIF1BQ5BJH7 314 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 OR2G6Q5TZ20 316 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 GLT8D1Q68CQ7 371 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 OR1L6Q8NGR2 347 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 SETD6Q8TBK2 473 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 C2CD4CQ8TF44 421 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 MFFQ9GZY8 342 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 RIMS4Q9H426 269 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-202ENST00000396629 BABAM2Q9NXR7 383 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 EXOSC1Q9Y3B2 195 aaKnown RBP6.23□□□□□ -1.41
SCFD1-202ENST00000396629 RPL36Q9Y3U8 105 aaKnown RBP6.23□□□□□ -1.41
SCFD1-202ENST00000396629 ORC6Q9Y5N6 252 aa6.23□□□□□ -1.41
SCFD1-202ENST00000396629 SHOXO15266 292 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 OR2J3O76001 311 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 LALBAP00709 142 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 IFNA4P05014 189 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 NANOS2P60321 138 aaKnown RBP6.22□□□□□ -1.41
SCFD1-202ENST00000396629 UBE2KP61086 200 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 RPS27AP62979 156 aaKnown RBP6.22□□□□□ -1.41
SCFD1-202ENST00000396629 RBMS2Q15434 407 aaKnown RBP6.22□□□□□ -1.41
SCFD1-202ENST00000396629 FAM106AQ4KMX7 169 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 OR4A47Q6IF82 309 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 BTNL8Q6UX41 500 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 TMPRSS11AQ6ZMR5 421 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 SLC38A6Q8IZM9 456 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 GVQW1Q8N7I0 195 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 PGLYRP3Q96LB9 341 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 TM2D1Q9BX74 207 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 FBXL7Q9UJT9 491 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 MGAT4AQ9UM21 535 aa6.22□□□□□ -1.41
SCFD1-202ENST00000396629 IGKV1-6A0A0C4DH72 117 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 A0A1W2PPK0 400 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 DYNC1I1O14576 645 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 SCTP09683 121 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 UBBP0CG47 229 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 RRASP10301 218 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 CTRB1P17538 263 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 HTR2CP28335 458 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 ARL3P36405 182 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 CBX3Q13185 183 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 VMA21Q3ZAQ7 101 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 CTRB2Q6GPI1 263 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 SLC25A42Q86VD7 318 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 NKAIN3Q8N8D7 197 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 C11orf45Q8TAV5 145 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 FBLIM1Q8WUP2 373 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 MARC2Q969Z3 335 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 CCDC140Q96MF4 163 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 SLC29A1Q99808 456 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 C11orf68Q9H3H3 251 aaKnown RBP6.21□□□□□ -1.41
SCFD1-202ENST00000396629 Q9N2K0 584 aa6.21□□□□□ -1.41
SCFD1-202ENST00000396629 ZNF320A2RRD8 509 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 ATP8B1O43520 1251 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 FCGR2BP31994 310 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-202ENST00000396629 KLK9Q2XQG4 91 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 OR10K2Q6IF99 312 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 RBPMS2Q6ZRY4 209 aaKnown RBP6.21□□□□□ -1.42
SCFD1-202ENST00000396629 C5orf30Q96GV9 206 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 DERL3Q96Q80 235 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 SPIN2AQ99865 258 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 SPIN2BQ9BPZ2 258 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 NICN1Q9BSH3 213 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 HDHD3Q9BSH5 251 aaPredicted RBP6.21□□□□□ -1.42
SCFD1-202ENST00000396629 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 SDHAF2Q9NX18 166 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 RDH8Q9NYR8 311 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 FBXL17Q9UF56 701 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 UBQLN2Q9UHD9 624 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 KLK9Q9UKQ9 250 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 ZNF257Q9Y2Q1 563 aa6.21□□□□□ -1.42
SCFD1-202ENST00000396629 A0A0A6YYD4 124 aa6.2□□□□□ -1.42
SCFD1-202ENST00000396629 EI24O14681 340 aa6.2□□□□□ -1.42
SCFD1-202ENST00000396629 GALP22466 123 aa6.2□□□□□ -1.42
SCFD1-202ENST00000396629 DCKP27707 260 aa6.2□□□□□ -1.42
SCFD1-202ENST00000396629 RTL8BQ17RB0 113 aa6.2□□□□□ -1.42
SCFD1-202ENST00000396629 CLEC19AQ6UXS0 136 aa6.2□□□□□ -1.42
SCFD1-202ENST00000396629 APH1BQ8WW43 257 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 289.1 ms