RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 LHFPL6Q9Y693 200 aa4.7□□□□□ -1.66
VPS13C-204ENST00000395898 TRBV9A0A0B4J1U6 114 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 C17orf51A8MQB3 221 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 TMEM229AB2RXF0 380 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 H3BVH4 76 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 J3KRW8 73 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 RPLP1P05386 114 aaKnown RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 NUBP1P53384 320 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 NCMAPQ5T1S8 102 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF738Q8NE65 137 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 TBX15Q96SF7 602 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 OPN3Q9H1Y3 402 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 CALYQ9NYX4 217 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 TCF20Q9UGU0 1960 aaKnown RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 PPIAL4CA0A0B4J2A2 164 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 PPIAL4GP0DN37 164 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 NRN1LQ496H8 165 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 TCF24Q7RTU0 167 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 WFDC3Q8IUB2 231 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 HSPB7Q9UBY9 170 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 HS3ST3B1Q9Y662 390 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ANAPC1Q9H1A4 1944 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 PGLYRP1O75594 196 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 APOBEC3AP31941 199 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 SNRPD3P62318 126 aaKnown RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 TMEM252Q8N6L7 170 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 MRPL32Q9BYC8 188 aaKnown RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 RBKSQ9H477 322 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 C9orf172C9J069 976 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 NDUFB4O95168 129 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 SLC25A53Q5H9E4 307 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ZCCHC14Q8WYQ9 949 aaKnown RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 CEP250Q9BV73 2442 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 IGLV1-36A0A0B4J1U3 117 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 PF4V1P10720 104 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 GLRXP35754 106 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 HSPE1P61604 102 aaKnown RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ABHD12Q8N2K0 398 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 CYB561D1Q8N8Q1 229 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ZDBF2Q9HCK1 2354 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 WNK2Q9Y3S1 2297 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 COL4A1P02462 1669 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ZPLD1Q8TCW7 415 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 TMEM54Q969K7 222 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 RALYQ9UKM9 306 aaKnown RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 IFITM10A6NMD0 228 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 FCGR2BP31994 310 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 MUC15Q8N387 334 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ITLN1Q8WWA0 313 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 SPSB4Q96A44 273 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF430Q9H8G1 570 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-204ENST00000395898 RAXQ9Y2V3 346 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 AUP1Q9Y679 476 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 OR4C46A6NHA9 309 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 NMUP48645 174 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 C12orf54Q6X4T0 127 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 FAM216AQ8WUB2 273 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 CCL19Q99731 98 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 LINC00470Q9BZP3 86 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 MAP1LC3AQ9H492 121 aa4.69□□□□□ -1.66
VPS13C-204ENST00000395898 LOC105371242A0A075B767 164 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 IGHV1-69-2A0A0G2JMI3 117 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF729A6NN14 1252 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 TSPOP30536 169 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 FUT5Q11128 374 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 UNQ9370/PRO34162Q6UXP9 181 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 C1orf162Q8NEQ5 155 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF488Q96MN9 340 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 PRR19A6NJB7 356 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 DIRC3C9JPN6 131 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 NTN1O95631 604 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 TRGC1P0CF51 173 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 OR51M1Q9H341 326 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 PRO1933Q9H354 126 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 TMEM140Q9NV12 185 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 ELF5Q9UKW6 265 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 NACAE9PAV3 2078 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 NUDT3O95989 172 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 GCGP01275 180 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 C8orf88P0DMB2 117 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 CBLN2Q8IUK8 224 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 OR5AC2Q9NZP5 309 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 MRPS18CQ9Y3D5 142 aaKnown RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 HEATR5AQ86XA9 2040 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 hCG_38984A0A1B0GV85 526 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 NKX2-8O15522 239 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 LEPROTL1O95214 131 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 RCC1P18754 421 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 PDLIM4P50479 330 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 TCTAP57738 103 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 TPRX1Q8N7U7 411 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 OR10AG1Q8NH19 301 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 EEF1AKMT3Q96AZ1 226 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 TP53RKQ96S44 253 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 MRPS16Q9Y3D3 137 aaKnown RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 PGPA6NDG6 321 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF883P0CG24 379 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 SP9P0CG40 484 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 C19orf54Q5BKX5 351 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 C10orf128Q5T292 105 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms