RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 FGFRL1Q8N441 504 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 TMEM101Q96IK0 257 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 SRD5A3Q9H8P0 318 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 PLSCR2Q9NRY7 297 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 MYO5AQ9Y4I1 1855 aaKnown RBP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 SMCHD1A6NHR9 2005 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 HTN1P15515 57 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 TGFBR1P36897 503 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 EFNA4P52798 201 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 CX3CL1P78423 397 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 BSPH1Q075Z2 132 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 MESP2Q0VG99 397 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 SRSF9Q13242 221 aaKnown RBP eCLIP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 ST6GALNAC3Q8NDV1 305 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 RAXQ9Y2V3 346 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 SOX21Q9Y651 276 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 HSPB1P04792 205 aaKnown RBP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 CD59P13987 128 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 ANOS1P23352 680 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 ATP6V0CP27449 155 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 TNFRSF9Q07011 255 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 MS4A3Q96HJ5 214 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 ZNF488Q96MN9 340 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 SLC50A1Q9BRV3 221 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 MAP1LC3AQ9H492 121 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 OR4C46A6NHA9 309 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 M0R3E3 92 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 NDUFS8O00217 210 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 RBFOX2O43251 390 aaKnown RBP eCLIP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 VDAC2P45880 294 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 CD200R1LQ6Q8B3 271 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 PRNTQ86SH4 94 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 COL11A2P13942 1736 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 TMEM14DPA8MWL7 114 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 SNURFLB1AK76 121 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 FABP4P15090 132 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 HINT1P49773 126 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-201ENST00000380701 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 TM2D1Q9BX74 207 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 OR51M1Q9H341 326 aa6.11□□□□□ -1.43
CCDC171-201ENST00000380701 IGKV3-7A0A075B6H7 116 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 AP4M1O00189 453 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 GGCTO75223 188 aaKnown RBP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 GATA3P23771 443 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 VWA1Q6PCB0 445 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 DTX1Q86Y01 620 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 OR4B1Q8NGF8 309 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 TAF15Q92804 592 aaKnown RBP eCLIP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 RBKSQ9H477 322 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 COL4A5P29400 1685 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 IGKV1D-42A0A075B6H8 117 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 GPX4P36969 197 aaPredicted RBP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 ZNF137PP52743 207 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 ZXDCQ2QGD7 858 aaPredicted RBP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 ARPC1AQ92747 370 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 TLNRD1Q9H1K6 362 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 C21orf62Q9NYP8 219 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 V9GYH0 126 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 C5orf52A6NGY3 159 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 CIDEAO60543 219 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 FCGR2BP31994 310 aaPredicted RBP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 LEPP41159 167 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 FUT5Q11128 374 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 MINOS1Q5TGZ0 78 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 ZNF826PQ6ZT77 177 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 KLK13Q9UKR3 277 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 MINOS1-NBL1R4GNA1 71 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 SCN1AP35498 2009 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 FAM90A9PA6NNJ1 464 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 LY6EQ16553 131 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 PVRIGQ6DKI7 326 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 C8orf46Q8TAG6 207 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 SIGLEC12Q96PQ1 595 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 REPIN1Q9BWE0 567 aaKnown RBP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 KLHDC2Q9Y2U9 406 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 SMAD7O15105 426 aaKnown RBP6.1□□□□□ -1.43
CCDC171-201ENST00000380701 TBR1Q16650 682 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 OVCH2Q7RTZ1 564 aa6.1□□□□□ -1.43
CCDC171-201ENST00000380701 A0A1W2PPE3 182 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 PGPA6NDG6 321 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 FGF8P55075 233 aaPredicted RBP6.09□□□□□ -1.43
CCDC171-201ENST00000380701 TCTAP57738 103 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 FAM27E3Q08E93 113 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 OR1N2Q8NGR9 330 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 MEX3AA1L020 520 aaKnown RBP6.09□□□□□ -1.43
CCDC171-201ENST00000380701 B4DSR2 109 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 ZIC3O60481 467 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 TFPI2P48307 235 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 ATP1A1-AS1Q5TC04 95 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 OR13A1Q8NGR1 328 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 NUP205Q92621 2012 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 NPFFO15130 113 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 ZNF207O43670 478 aaKnown RBP6.09□□□□□ -1.43
CCDC171-201ENST00000380701 CD74P04233 296 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 LINC00271P0C7V0 271 aa6.09□□□□□ -1.43
CCDC171-201ENST00000380701 MEF2BQ02080 365 aaPredicted RBP6.09□□□□□ -1.43
CCDC171-201ENST00000380701 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms