RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 INPP1P49441 399 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 RTL8BQ17RB0 113 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 C16orf82Q7Z2V1 217 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 C11orf44Q8N8P7 122 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 Q8N9W7 124 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 CLCC1Q96S66 551 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 RASL11BQ9BPW5 248 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 FBXL15Q9H469 300 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 PRELID3BQ9Y3B1 194 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 CLPSL1A2RUU4 121 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 SHOXO15266 292 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 NBR2O15453 112 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 SLC25A17O43808 307 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 RAMP3O60896 148 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 ZNF735P0CB33 412 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 VSIG10L2P0DP72 767 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 KRTAP21-3Q3LHN1 58 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 C12orf54Q6X4T0 127 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 IDO2Q6ZQW0 420 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 CMTM1Q8IZ96 169 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 VKORC1L1Q8N0U8 176 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 TERB2Q8NHR7 220 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 MARCH1Q8TCQ1 289 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 DDB2Q92466 427 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 HARBI1Q96MB7 349 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 SDHCQ99643 169 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 HSD17B10Q99714 261 aaKnown RBP9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 KIAA1456Q9P272 454 aa9.31□□□□□ -0.92
DEPDC4-202ENST00000378244 M0QZK8 103 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 NDUFA7O95182 113 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 PTBP1P26599 531 aaKnown RBP eCLIP9.3□□□□□ -0.921e-9■■■■□ 21
DEPDC4-202ENST00000378244 BRWD1-AS2P59051 145 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 CBX3Q13185 183 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 MEF2DQ14814 521 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 TRIQKQ629K1 86 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 PDPNQ86YL7 162 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 SPAG16Q8N0X2 631 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 FAM71E2Q8N5Q1 922 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 C3orf56Q8N813 242 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 ADTRPQ96IZ2 230 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 ZNF107Q9UII5 783 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 PLXNB1O43157 2135 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 SRRM4A7MD48 611 aaKnown RBP9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 DISC1C4P0D8 188 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 FGF16O43320 207 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 RPA2P15927 270 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 ZNF45Q02386 682 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 GDPD1Q8N9F7 314 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 MRGPRFQ96AM1 343 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 NOL4LQ96MY1 436 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 HSPB9Q9BQS6 159 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 TPSG1Q9NRR2 321 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 SERTAD4Q9NUC0 356 aa9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 METTL1Q9UBP6 276 aaKnown RBP9.3□□□□□ -0.92
DEPDC4-202ENST00000378244 GPR31O00270 319 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 FCN1O00602 326 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 EIF4EBP1Q13541 118 aaPredicted RBP9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 LIN54Q6MZP7 749 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 ZNF66Q6ZN08 573 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 SSX9Q7RTT3 188 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 OR8H1Q8NGG4 311 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 RANBP3Q9H6Z4 567 aaPredicted RBP9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 HRASLSQ9HDD0 168 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 AKIP1Q9NQ31 210 aa9.29□□□□□ -0.92
DEPDC4-202ENST00000378244 RRHO14718 337 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 IL7P13232 177 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 VDAC2P45880 294 aaPredicted RBP9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 AP3S2P59780 193 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 PJVKQ0ZLH3 352 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 CATR1Q13166 79 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 PSG5Q15238 335 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 C5orf64Q2M2E5 130 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 LPCAT3Q6P1A2 487 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 SLC35E3Q7Z769 313 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 SLC38A6Q8IZM9 456 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 ZBTB34Q8NCN2 500 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 OR13C8Q8NGS7 320 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 C16orf95Q9H693 158 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 SLC2A9Q9NRM0 540 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 LIN7CQ9NUP9 197 aaKnown RBP9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 PIGPP57054 158 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 MZT2BQ6NZ67 158 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 ZNF329Q86UD4 541 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 TBC1D26Q86UD7 250 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 POC5Q8NA72 575 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 NPBQ8NG41 125 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 BORCS5Q969J3 196 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 TSNAXQ99598 290 aaKnown RBP9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 PRRT1Q99946 306 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 RSRP1Q9BUV0 290 aa9.28□□□□□ -0.92
DEPDC4-202ENST00000378244 DNHD1Q96M86 4753 aa9.27□□□□□ -0.92
DEPDC4-202ENST00000378244 FAUP35544 74 aaKnown RBP9.27□□□□□ -0.92
DEPDC4-202ENST00000378244 PROK1P58294 105 aa9.27□□□□□ -0.92
DEPDC4-202ENST00000378244 GNB1P62873 340 aa9.27□□□□□ -0.92
DEPDC4-202ENST00000378244 TMEM177Q53S58 311 aa9.27□□□□□ -0.92
DEPDC4-202ENST00000378244 C10orf99Q6UWK7 81 aa9.27□□□□□ -0.92
DEPDC4-202ENST00000378244 KLHDC1Q8N7A1 406 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms