RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 IGKV1-33P01594 117 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 OR2B8PP59922 312 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 TNFAIP6P98066 277 aaPredicted RBP23.98■■□□□ 1.43
SSBP3-204ENST00000371320 ACSM6Q6P461 480 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 C22orf34Q6ZV56 151 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 LHX4Q969G2 390 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 YPEL4Q96NS1 127 aa23.98■■□□□ 1.43
SSBP3-204ENST00000371320 IFNA17P01571 189 aa23.97■■□□□ 1.43
SSBP3-204ENST00000371320 SELLP14151 372 aa23.97■■□□□ 1.43
SSBP3-204ENST00000371320 FAM90A2PQ658T7 463 aa23.97■■□□□ 1.43
SSBP3-204ENST00000371320 MALSU1Q96EH3 234 aa23.97■■□□□ 1.43
SSBP3-204ENST00000371320 IFI27L2Q9H2X8 130 aa23.97■■□□□ 1.43
SSBP3-204ENST00000371320 GCM1Q9NP62 436 aa23.97■■□□□ 1.43
SSBP3-204ENST00000371320 VAX2Q9UIW0 290 aa23.97■■□□□ 1.43
SSBP3-204ENST00000371320 RIF1Q5UIP0 2472 aaKnown RBP23.97■■□□□ 1.43
SSBP3-204ENST00000371320 S100A6P06703 90 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 CD40P25942 277 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 GNB2P62879 340 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 PRAMEF5Q5TYX0 476 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 SSX9Q7RTT3 188 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 FAM222BQ8WU58 562 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 P2RX4Q99571 388 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 IL19Q9UHD0 177 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 ZFHX2Q9C0A1 2572 aaPredicted RBP23.96■■□□□ 1.43
SSBP3-204ENST00000371320 FAM90A9PA6NNJ1 464 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 EIF3GO75821 320 aaKnown RBP eCLIP23.96■■□□□ 1.43
SSBP3-204ENST00000371320 CA5BP1Q8WTZ4 195 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 COL25A1Q9BXS0 654 aaPredicted RBP23.96■■□□□ 1.43
SSBP3-204ENST00000371320 NCOR1P1Q9H4R4 102 aa23.96■■□□□ 1.43
SSBP3-204ENST00000371320 MKRN2OSH3BPM6 223 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 IGHV1-46P01743 117 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 MBP02144 154 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 CGB3P0DN86 165 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 CGB7P0DN87 165 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 TFF3Q07654 80 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 VWC2Q2TAL6 325 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 S1PR3Q99500 378 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 RAB9BQ9NP90 201 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 RBFOX2O43251 390 aaKnown RBP eCLIP23.95■■□□□ 1.423e-6■□□□□ 10.7
SSBP3-204ENST00000371320 ERVK-16P61578 105 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 AARDQ4LEZ3 155 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 ZNF709Q8N972 641 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 OR4A16Q8NH70 328 aa23.95■■□□□ 1.42
SSBP3-204ENST00000371320 C17orf58Q2M2W7 97 aa23.94■■□□□ 1.42
SSBP3-204ENST00000371320 FFAR4Q5NUL3 377 aa23.94■■□□□ 1.42
SSBP3-204ENST00000371320 HEPN1Q6WQI6 88 aa23.94■■□□□ 1.42
SSBP3-204ENST00000371320 NPCDR1Q9BY65 106 aa23.94■■□□□ 1.42
SSBP3-204ENST00000371320 LAMA5O15230 3695 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 C15orf62A8K5M9 175 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 SLC31A2O15432 143 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 RAB7AP51149 207 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 PMS2P11Q13670 270 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 RBMS3Q6XE24 437 aaKnown RBP23.93■■□□□ 1.42
SSBP3-204ENST00000371320 OR10G9Q8NGN4 311 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 OR10G7Q8NGN6 311 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 Q8TCH9 128 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 LEAP2Q969E1 77 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 SDSLQ96GA7 329 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 C5orf52A6NGY3 159 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 CYB5R3P00387 301 aaPredicted RBP23.93■■□□□ 1.42
SSBP3-204ENST00000371320 TNFSF4P23510 183 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 SPCS3P61009 180 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 SLC25A22Q9H936 323 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 SIRT7Q9NRC8 400 aa23.93■■□□□ 1.42
SSBP3-204ENST00000371320 DOCK11Q5JSL3 2073 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 AKAP13Q12802 2813 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 KBTBD11-OT1A0A1B0GTJ5 212 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 CTXND1A0A1B0GTU2 59 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 LY86O95711 162 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 KIR2DS2P43631 304 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 STUMQ69YW2 141 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 VKORC1L1Q8N0U8 176 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 DEFB108BQ8NET1 73 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 GFOD1Q9NXC2 390 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 NBEAQ8NFP9 2946 aa23.92■■□□□ 1.42
SSBP3-204ENST00000371320 MGAQ8IWI9 3026 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 ZNF98A6NK75 572 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 B4DEV8 164 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 ITGB1BP1O14713 200 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 UTF1Q5T230 341 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 DUX4L9Q6RFH8 374 aaPredicted RBP23.91■■□□□ 1.42
SSBP3-204ENST00000371320 TRGV10A0A0A0MS01 117 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 A0A1W2PPE3 182 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 CXorf65A6NEN9 183 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 NQO2P16083 231 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 GAB2Q9UQC2 676 aa23.91■■□□□ 1.42
SSBP3-204ENST00000371320 HMGB3O15347 200 aaKnown RBP23.9■■□□□ 1.42
SSBP3-204ENST00000371320 CCKARP32238 428 aa23.9■■□□□ 1.42
SSBP3-204ENST00000371320 PLA2G5P39877 138 aa23.9■■□□□ 1.42
SSBP3-204ENST00000371320 PNRC1Q12796 327 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-204ENST00000371320 ACTR3CQ9C0K3 210 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-204ENST00000371320 MUC6Q6W4X9 2439 aa23.9■■□□□ 1.42
SSBP3-204ENST00000371320 RP1L1Q8IWN7 2480 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-204ENST00000371320 C17orf112F2Z3M2 114 aa23.9■■□□□ 1.42
SSBP3-204ENST00000371320 MDKP21741 143 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-204ENST00000371320 RPP30P78346 268 aaKnown RBP23.9■■□□□ 1.42
SSBP3-204ENST00000371320 CT45A1Q5HYN5 189 aa23.9■■□□□ 1.42
SSBP3-204ENST00000371320 DOLPP1Q86YN1 238 aa23.9■■□□□ 1.42
SSBP3-204ENST00000371320 OR52E5Q8NH55 327 aa23.9■■□□□ 1.42
SSBP3-204ENST00000371320 CT45A3Q8NHU0 189 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms