RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TMEM155Q4W5P6 130 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 RNASE10Q5GAN6 216 aaKnown RBP2.9□□□□□ -1.95
MCF2-202ENST00000370573 AADACL3Q5VUY0 350 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 GGNBP1Q5YKI7 109 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 DHRS11Q6UWP2 260 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 ZNF782Q6ZMW2 699 aaPredicted RBP2.9□□□□□ -1.95
MCF2-202ENST00000370573 SLC36A1Q7Z2H8 476 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 LHFPL1Q86WI0 220 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 LINC00518Q8N0U6 118 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 C10orf105Q8TEF2 133 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 DEDD2Q8WXF8 326 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 UPRTQ96BW1 309 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 TIMD4Q96H15 378 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 LURAP1Q96LR2 239 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 ASCL2Q99929 193 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 PARP12Q9H0J9 701 aaKnown RBP2.9□□□□□ -1.95
MCF2-202ENST00000370573 KLK15Q9H2R5 256 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 PATZ1Q9HBE1 687 aaKnown RBP2.9□□□□□ -1.95
MCF2-202ENST00000370573 EHFQ9NZC4 300 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 DOCK11Q5JSL3 2073 aa2.9□□□□□ -1.95
MCF2-202ENST00000370573 TRAV6A0A075B6T7 132 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 TRBV6-7A0A0A0MS04 114 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IGKV1D-13A0A0B4J2D9 117 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 DISC1C4P0D8 188 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 MMP23AO75900 390 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 SNAPC5O75971 98 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 NDUFB6O95139 128 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 HBZP02008 142 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 OPN1MWP04001 364 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 OPN1MW2P0DN77 364 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 OPN1MW3P0DN78 364 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IGKV1-13P0DP09 117 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 AADACP22760 399 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 NFYAP23511 347 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 FCGR2CP31995 323 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 GLP1RP43220 463 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 PDLIM4P50479 330 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 DLX6P56179 175 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 RAB25P57735 213 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 TSPAN5P62079 268 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 SNRPEP62304 92 aaKnown RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 GNMTQ14749 295 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 SCGB2B2Q4G0G5 96 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 ACTBL2Q562R1 376 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 LRRC10Q5BKY1 277 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 WDR25Q64LD2 544 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 MOB1BQ7L9L4 216 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 MUC20Q8N307 709 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 OR2AK2Q8NG84 335 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 OR4A4PQ8NGN8 299 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 TERB2Q8NHR7 220 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 MARCH1Q8TCQ1 289 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 FAM216AQ8WUB2 273 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 CAPSLQ8WWF8 208 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 ARL11Q969Q4 196 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 TMEM18Q96B42 140 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 MARVELD1Q9BSK0 173 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 CABLES2Q9BTV7 478 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 BPESC1Q9GZL8 116 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 NECAP2Q9NVZ3 263 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 SLC2A8Q9NY64 477 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 OR1A1Q9P1Q5 309 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 MIOXQ9UGB7 285 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 ZNF221Q9UK13 617 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 VSIG4Q9Y279 399 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 VPS13CQ709C8 3753 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 ZANQ9Y493 2812 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 CSMD2Q7Z408 3487 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IGHV4-30-2A0A087WSY4 118 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IGHV3-43A0A0B4J1X8 118 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 KIR2DS1A0A191URI9 304 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 C13orf42A0A1B0GVH6 325 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 INMT-MINDY4F8WBC2 141 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 ARPC1BO15143 372 aaKnown RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 PHF1O43189 567 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 IGLV2-14P01704 120 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IGHV2-5P01817 119 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IFNA6P05013 189 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IGHV3-43DP0DP04 118 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 CCL3L1P16619 93 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 GZMHP20718 246 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 OMGP23515 440 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IL2RGP31785 369 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 FAUP35544 74 aaKnown RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 CEACAM6P40199 344 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 KIR2DS4P43632 304 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 RAB14P61106 215 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 RPL31P62899 125 aaKnown RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 MEF2CQ06413 473 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 PNRC1Q12796 327 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 KIR2DS1Q14954 304 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 PRIMA1Q86XR5 153 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 H1FOOQ8IZA3 346 aaPredicted RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 ARRDC1Q8N5I2 433 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 SPICQ8N5J4 248 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 C11orf42Q8N5U0 333 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 ADAD2Q8NCV1 583 aaKnown RBP2.89□□□□□ -1.95
MCF2-202ENST00000370573 LY6G5BQ8NDX9 201 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 CLDND2Q8NHS1 167 aa2.89□□□□□ -1.95
MCF2-202ENST00000370573 IL1F10Q8WWZ1 152 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms