RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RBMXL2O75526 392 aaKnown RBP13.78□□□□□ -0.2
SAMM50-201ENST00000350028 SCAF4O95104 1147 aaKnown RBP13.78□□□□□ -0.2
SAMM50-201ENST00000350028 CA7P43166 264 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 PPT1P50897 306 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 SERF2P84101 59 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 SP5Q6BEB4 398 aaPredicted RBP13.78□□□□□ -0.2
SAMM50-201ENST00000350028 DHRS7BQ6IAN0 325 aaPredicted RBP13.78□□□□□ -0.2
SAMM50-201ENST00000350028 TCF23Q7RTU1 214 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 ADTRPQ96IZ2 230 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 OR4C12Q96R67 309 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 WDR61Q9GZS3 305 aaKnown RBP13.78□□□□□ -0.2
SAMM50-201ENST00000350028 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 PPIAL4EA0A075B759 164 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 LOC105371267A0A1B0GV96 52 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 CEBPZOSA8MTT3 80 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 PPIAL4DF5H284 164 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 TMEM178BH3BS89 294 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 PPIAL4FP0DN26 164 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 NPBWR1P48145 328 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 THBS3P49746 956 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 ERVK-16P61578 105 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 MEF2CQ06413 473 aaPredicted RBP13.78□□□□□ -0.2
SAMM50-201ENST00000350028 ZNF439Q8NDP4 499 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 OR10A7Q8NGE5 316 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 DDB2Q92466 427 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
SAMM50-201ENST00000350028 KIAA1456Q9P272 454 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 PPIAL4AQ9Y536 164 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 LINC00312Q9Y6C7 94 aa13.78□□□□□ -0.2
SAMM50-201ENST00000350028 USF3Q68DE3 2245 aa13.77□□□□□ -0.2
SAMM50-201ENST00000350028 E7EQL1 145 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 ATXN7O15265 892 aaPredicted RBP13.77□□□□□ -0.21
SAMM50-201ENST00000350028 ZG16O60844 167 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 F12P00748 615 aaPredicted RBP13.77□□□□□ -0.21
SAMM50-201ENST00000350028 IGHV3-7P01780 117 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 OR9G9P0C7N8 305 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 NQO2P16083 231 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 FBXL19-AS1Q494R0 122 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 OR8G2PQ6IF36 304 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 CLRN3Q8NCR9 226 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 OR4S2Q8NH73 311 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 RSG1Q9BU20 258 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 SLC35B3Q9H1N7 401 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 MS4A5Q9H3V2 200 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 TIMM9Q9Y5J7 89 aa13.77□□□□□ -0.21
SAMM50-201ENST00000350028 TRAV1-1A0A0B4J248 108 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 RBFOX3A6NFN3 312 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 GPR37O15354 613 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 TMPRSS2O15393 492 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 CD3EP07766 207 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 NDUFB7P17568 137 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 NFYBP25208 207 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 DMRTC2Q8IXT2 367 aaPredicted RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 ZCCHC24Q8N2G6 241 aaKnown RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 ST6GALNAC3Q8NDV1 305 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 OR10P1Q8NGE3 313 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 OR52E5Q8NH55 327 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 OR4A16Q8NH70 328 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 TAF15Q92804 592 aaKnown RBP eCLIP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 LEAP2Q969E1 77 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 PINX1Q96BK5 328 aaKnown RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 RBMXL1Q96E39 390 aaKnown RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 TMEM147Q9BVK8 224 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 QTRT1Q9BXR0 403 aaKnown RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 DYNLRB1Q9NP97 96 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 SLC25A10Q9UBX3 287 aaPredicted RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 RPUSD1Q9UJJ7 312 aaKnown RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 ATRXP46100 2492 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 A0A1B0GV50 99 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 PMS2P5A8MQ11 134 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
SAMM50-201ENST00000350028 SPCS3P61009 180 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 CCL20P78556 96 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 EFNB3Q15768 340 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 SFT2D1Q8WV19 159 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 GAL3ST2Q9H3Q3 398 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 TMEM106BQ9NUM4 274 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 NDRG3Q9UGV2 375 aa13.76□□□□□ -0.21
SAMM50-201ENST00000350028 SAA2-SAA4A0A096LPE2 208 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 SAA2P0DJI9 122 aaPredicted RBP13.75□□□□□ -0.21
SAMM50-201ENST00000350028 ATF4P18848 351 aaPredicted RBP13.75□□□□□ -0.21
SAMM50-201ENST00000350028 CHRNB4P30926 498 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 GNB2P62879 340 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 UTF1Q5T230 341 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 CENPVQ7Z7K6 275 aaPredicted RBP13.75□□□□□ -0.21
SAMM50-201ENST00000350028 LYG1Q8N1E2 194 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 ZDHHC16Q969W1 377 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 CLCC1Q96S66 551 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 ZNF251Q9BRH9 671 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 PRORYQ9H606 182 aa13.75□□□□□ -0.21
SAMM50-201ENST00000350028 PLCE1Q9P212 2302 aa13.74□□□□□ -0.21
SAMM50-201ENST00000350028 A0A1W2PPE3 182 aa13.74□□□□□ -0.21
SAMM50-201ENST00000350028 TMEM8BA6NDV4 472 aa13.74□□□□□ -0.21
SAMM50-201ENST00000350028 B9A039 149 aa13.74□□□□□ -0.21
SAMM50-201ENST00000350028 TNFRSF13BO14836 293 aaPredicted RBP13.74□□□□□ -0.21
SAMM50-201ENST00000350028 IFNA17P01571 189 aa13.74□□□□□ -0.21
SAMM50-201ENST00000350028 RPP30P78346 268 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms