RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 IGHV3-13P01766 116 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 Q3ZCU0 254 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 ZNF383Q8NA42 475 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 OR4C12Q96R67 309 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 PSMG3Q9BT73 122 aaPredicted RBP16.73■□□□□ 0.27
SPG7-202ENST00000341316 GPR61Q9BZJ8 451 aa16.73■□□□□ 0.27
SPG7-202ENST00000341316 FAM90A26D6RGX4 464 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 TRGC1P0CF51 173 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 PAX5Q02548 391 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 PNRC1Q12796 327 aaPredicted RBP16.72■□□□□ 0.27
SPG7-202ENST00000341316 MOGAT3Q86VF5 341 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 HIST3H2BBQ8N257 126 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 LILRB2Q8N423 598 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 ABHD5Q8WTS1 349 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 FRZBQ92765 325 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 CLN8Q9UBY8 286 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 ACACAQ13085 2346 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 APC2O95996 2303 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 LRRC30A6NM36 301 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 PPP1R2P9O14990 202 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 PROP1O75360 226 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 CYB5R3P00387 301 aaPredicted RBP16.72■□□□□ 0.27
SPG7-202ENST00000341316 PLA2G5P39877 138 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 RND2P52198 227 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 MZT1Q08AG7 82 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 CATR1Q13166 79 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 LRRC75BQ2VPJ9 315 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 TMEM14EPQ6UXP3 125 aa16.72■□□□□ 0.27
SPG7-202ENST00000341316 ZNF729A6NN14 1252 aaPredicted RBP16.71■□□□□ 0.27
SPG7-202ENST00000341316 CLDN34H7C241 214 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 SPINT2O43291 252 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 SPRY3O43610 288 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 CRYAAP02489 173 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 CD55P08174 381 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 HBG1P69891 147 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 HBG2P69892 147 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 ZNRF1Q8ND25 227 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 MEGF10Q96KG7 1140 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 SSX3Q99909 188 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 SDF2L1Q9HCN8 221 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 CEBPZOSA8MTT3 80 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 ELLP55199 621 aaPredicted RBP16.71■□□□□ 0.27
SPG7-202ENST00000341316 HTD2P86397 168 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 FAM201AQ5SY85 155 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 OR8G2PQ6IF36 304 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 PFDN5Q99471 154 aa16.71■□□□□ 0.27
SPG7-202ENST00000341316 TIMP3P35625 211 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 GLRXP35754 106 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 CFHR2P36980 270 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 KLF3P57682 345 aaPredicted RBP16.7■□□□□ 0.26
SPG7-202ENST00000341316 FAM27E3Q08E93 113 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 MSMO1Q15800 293 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 ZDHHC16Q969W1 377 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 WDR61Q9GZS3 305 aaKnown RBP16.7■□□□□ 0.26
SPG7-202ENST00000341316 TMEM242Q9NWH2 141 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 CLDN14O95500 239 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 SLC38A11Q08AI6 406 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 C4orf17Q53FE4 359 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 TMEM41BQ5BJD5 291 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 UTF1Q5T230 341 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 NCR3LG1Q68D85 454 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 ITLN1Q8WWA0 313 aa16.7■□□□□ 0.26
SPG7-202ENST00000341316 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.7■□□□□ 0.26
SPG7-202ENST00000341316 PLCE1Q9P212 2302 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 ELOA3CA0A087WX78 387 aaPredicted RBP16.69■□□□□ 0.26
SPG7-202ENST00000341316 UBE2L5PA0A1B0GUS4 154 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 MAP1LC3B2A6NCE7 125 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 IGHV3-7P01780 117 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 ADH4P08319 380 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 SERF2P84101 59 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 ZNF66Q6ZN08 573 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 P2RX4Q99571 388 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 MAP1LC3BQ9GZQ8 125 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 VAX2Q9UIW0 290 aa16.69■□□□□ 0.26
SPG7-202ENST00000341316 ZG16O60844 167 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 LHBP01229 141 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 SELLP14151 372 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 RPS16P62249 146 aaKnown RBP16.68■□□□□ 0.26
SPG7-202ENST00000341316 HNF4GQ14541 408 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 SPINK9Q5DT21 86 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 MRGPRGQ86SM5 289 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 SNX22Q96L94 193 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 IGLV3-9A0A075B6K5 115 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 GATCO43716 136 aaKnown RBP16.68■□□□□ 0.26
SPG7-202ENST00000341316 CEACAM8P31997 349 aaPredicted RBP16.68■□□□□ 0.26
SPG7-202ENST00000341316 MORN2Q502X0 79 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 FAM90A1Q86YD7 464 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 HSD17B10Q99714 261 aaKnown RBP16.68■□□□□ 0.26
SPG7-202ENST00000341316 MRPL37Q9BZE1 423 aaKnown RBP16.68■□□□□ 0.26
SPG7-202ENST00000341316 CEP295Q9C0D2 2601 aa16.68■□□□□ 0.26
SPG7-202ENST00000341316 PMS2P5A8MQ11 134 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 MGST3O14880 152 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 RAB29O14966 203 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 CRYABP02511 175 aaKnown RBP16.67■□□□□ 0.26
SPG7-202ENST00000341316 MDKP21741 143 aaPredicted RBP16.67■□□□□ 0.26
SPG7-202ENST00000341316 ZNF134P52741 427 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 CR1LQ2VPA4 569 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 TRAT1Q6PIZ9 186 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 H2BFWTQ7Z2G1 175 aa16.67■□□□□ 0.26
SPG7-202ENST00000341316 TAF15Q92804 592 aaKnown RBP eCLIP16.67■□□□□ 0.261e-8■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms