RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 HSPB9Q9BQS6 159 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 MSL2Q9HCI7 577 aa11.6□□□□□ -0.55
SYNE3-201ENST00000334258 KITLGP21583 273 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 NPPCP23582 126 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 TPPP2P59282 170 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 BAGE3Q86Y29 109 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 BAGE2Q86Y30 109 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 OR10D3Q8NH80 312 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 VAMP8Q9BV40 100 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 C1QTNF5Q9BXJ0 243 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 TMEM106BQ9NUM4 274 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 TIMM9Q9Y5J7 89 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 DOCK7Q96N67 2140 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 TRAV24A0A0B4J272 114 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 IGHV3-64DA0A0J9YX35 117 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 SIRPB1O00241 398 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 G6PCP35575 357 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 CDC34P49427 236 aaPredicted RBP11.59□□□□□ -0.55
SYNE3-201ENST00000334258 RPS19BP1Q86WX3 136 aaKnown RBP11.59□□□□□ -0.55
SYNE3-201ENST00000334258 MCEMP1Q8IX19 187 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 FAM58AQ8N1B3 248 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 ZNF808Q8N4W9 903 aaPredicted RBP11.59□□□□□ -0.55
SYNE3-201ENST00000334258 BTF3L4Q96K17 158 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 PCED1AQ9H1Q7 454 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 DLL3Q9NYJ7 618 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 PXMP4Q9Y6I8 212 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 A0A1W2PPV4 95 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 SERPINA7P05543 415 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 ADMP35318 185 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 ATP5G3P48201 142 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 MSMO1Q15800 293 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 RIPPLY2Q5TAB7 128 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 TMEM108Q6UXF1 575 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 DUSP23Q9BVJ7 150 aa11.59□□□□□ -0.55
SYNE3-201ENST00000334258 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
SYNE3-201ENST00000334258 NGFP01138 241 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 RPL15P61313 204 aaKnown RBP11.58□□□□□ -0.56
SYNE3-201ENST00000334258 IGFBP7Q16270 282 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 TMEM14EPQ6UXP3 125 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 SPSB4Q96A44 273 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 MIEN1Q9BRT3 115 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 PRDM14Q9GZV8 571 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 USF3Q68DE3 2245 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 ZNF716A6NP11 495 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 F6UZH7 168 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 THBS3P49746 956 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 ARF1P84077 181 aaKnown RBP11.58□□□□□ -0.56
SYNE3-201ENST00000334258 ZNF90Q03938 601 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 PCOLCEQ15113 449 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 WIPI1Q5MNZ9 446 aaPredicted RBP11.58□□□□□ -0.56
SYNE3-201ENST00000334258 SAXO1Q8IYX7 474 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 OR5A2Q8NGI9 324 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 PROK2Q9HC23 129 aa11.58□□□□□ -0.56
SYNE3-201ENST00000334258 TRAV38-1A0A0B4J264 116 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 MRPL33O75394 65 aaKnown RBP11.57□□□□□ -0.56
SYNE3-201ENST00000334258 SYNGR4O95473 234 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 CBLN1P23435 193 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 EDDM3BP56851 147 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 GNB1P62873 340 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 SRYQ05066 204 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 Q6ZVH6 145 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 DRAM1Q8N682 238 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 OR5P3Q8WZ94 311 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 FAM103A1Q9BTL3 118 aaKnown RBP11.57□□□□□ -0.56
SYNE3-201ENST00000334258 AKAP13Q12802 2813 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 ZNF292O60281 2723 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 ANKRD30BLA7E2S9 258 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 CRISP2P16562 243 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 RAB7AP51149 207 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 KRTAP27-1Q3LI81 207 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 GCSAMLQ5JQS6 135 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 OR1L1Q8NH94 360 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 NPCDR1Q9BY65 106 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 NBEAQ8NFP9 2946 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 ZG16O60844 167 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 P04436 131 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 ATP6V1FQ16864 119 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 Q6ZWC4 215 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 LYG1Q8N1E2 194 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 ZNF114Q8NC26 417 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 SFRP2Q96HF1 295 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 OR2J1Q9GZK6 312 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 FREM1Q5H8C1 2179 aa11.57□□□□□ -0.56
SYNE3-201ENST00000334258 A0A0G2JMM0 328 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 A0A1W2PPB8 328 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 A0A1W2PRS3 328 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 LNP1A1A4G5 178 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 KIR3DP1A8MWS1 328 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 C17orf112F2Z3M2 114 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 RAMP3O60896 148 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 CHRNB4P30926 498 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 TMPRSS7Q7RTY8 843 aa11.56□□□□□ -0.56
SYNE3-201ENST00000334258 ALKBH7Q9BT30 221 aaPredicted RBP11.56□□□□□ -0.56
SYNE3-201ENST00000334258 PDE6DO43924 150 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms