RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 P2RY1P47900 373 aa15.05■□□□□ -0
USP39-201ENST00000323701 OR10A7Q8NGE5 316 aa15.05■□□□□ -0
USP39-201ENST00000323701 PLEKHA2Q9HB19 425 aa15.05■□□□□ -0
USP39-201ENST00000323701 LPAR3Q9UBY5 353 aa15.05■□□□□ -0
USP39-201ENST00000323701 C22orf46C9J442 243 aa15.04■□□□□ -0
USP39-201ENST00000323701 F12P00748 615 aaPredicted RBP15.04■□□□□ -0
USP39-201ENST00000323701 CT45A6P0DMU7 189 aa15.04■□□□□ -0
USP39-201ENST00000323701 CT45A5P0DMU8 189 aa15.04■□□□□ -0
USP39-201ENST00000323701 CT45A7P0DMV0 189 aa15.04■□□□□ -0
USP39-201ENST00000323701 IGHV1-8P0DP01 117 aa15.04■□□□□ -0
USP39-201ENST00000323701 STPG2Q8N412 459 aa15.04■□□□□ -0
USP39-201ENST00000323701 RAB1CQ92928 201 aa15.04■□□□□ -0
USP39-201ENST00000323701 TENM4Q6N022 2769 aa15.04■□□□□ -0
USP39-201ENST00000323701 H3BP45 60 aa15.04■□□□□ -0
USP39-201ENST00000323701 CAV2P51636 162 aa15.04■□□□□ -0
USP39-201ENST00000323701 TMEM30BQ3MIR4 351 aa15.04■□□□□ -0
USP39-201ENST00000323701 SSX9Q7RTT3 188 aa15.04■□□□□ -0
USP39-201ENST00000323701 OR2C3Q8N628 320 aa15.04■□□□□ -0
USP39-201ENST00000323701 MS4A7Q9GZW8 240 aaPredicted RBP15.04■□□□□ -0
USP39-201ENST00000323701 FAM212BQ9NTI7 297 aaPredicted RBP15.04■□□□□ -0
USP39-201ENST00000323701 ZFP57Q9NU63 452 aa15.04■□□□□ -0
USP39-201ENST00000323701 TRBV23-1A0A0A0MS06 115 aa15.03■□□□□ -0
USP39-201ENST00000323701 WRBO00258 174 aa15.03■□□□□ -0
USP39-201ENST00000323701 EWSR1Q01844 656 aaKnown RBP eCLIP15.03■□□□□ -0
USP39-201ENST00000323701 TCTEX1D1Q8N7M0 179 aa15.03■□□□□ -0
USP39-201ENST00000323701 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.03■□□□□ -0
USP39-201ENST00000323701 STOML3Q8TAV4 291 aa15.03■□□□□ -0
USP39-201ENST00000323701 R3HDM4Q96D70 268 aa15.03■□□□□ -0
USP39-201ENST00000323701 NEIL1Q96FI4 390 aaPredicted RBP15.03■□□□□ -0
USP39-201ENST00000323701 TIMD4Q96H15 378 aa15.03■□□□□ -0
USP39-201ENST00000323701 LYRM2Q9NU23 88 aaPredicted RBP15.03■□□□□ -0
USP39-201ENST00000323701 OVOL3O00110 214 aa15.02■□□□□ -0
USP39-201ENST00000323701 TOR1AO14656 332 aa15.02■□□□□ -0
USP39-201ENST00000323701 GPR137BO60478 399 aa15.02■□□□□ -0
USP39-201ENST00000323701 OR9G9P0C7N8 305 aa15.02■□□□□ -0
USP39-201ENST00000323701 IAPPP10997 89 aa15.02■□□□□ -0
USP39-201ENST00000323701 REG1BP48304 166 aa15.02■□□□□ -0
USP39-201ENST00000323701 OR8B3Q8NGG8 313 aa15.02■□□□□ -0
USP39-201ENST00000323701 OR8B2Q96RD0 313 aa15.02■□□□□ -0
USP39-201ENST00000323701 S1PR3Q99500 378 aa15.02■□□□□ -0
USP39-201ENST00000323701 SLC25A32Q9H2D1 315 aa15.02■□□□□ -0
USP39-201ENST00000323701 MIOXQ9UGB7 285 aa15.02■□□□□ -0
USP39-201ENST00000323701 SESN1Q9Y6P5 492 aa15.02■□□□□ -0
USP39-201ENST00000323701 IGKV1-16P04430 117 aa15.02□□□□□ -0.01
USP39-201ENST00000323701 HSD17B13Q7Z5P4 300 aaPredicted RBP15.02□□□□□ -0.01
USP39-201ENST00000323701 BARX1Q9HBU1 254 aaPredicted RBP15.02□□□□□ -0.01
USP39-201ENST00000323701 CELSR1Q9NYQ6 3014 aa15.02□□□□□ -0.01
USP39-201ENST00000323701 TRAV3A0A0B4J244 114 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 PPIAL4CA0A0B4J2A2 164 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 J3QR06 171 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 CST7O76096 145 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 HPRT1P00492 218 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 PPIAL4GP0DN37 164 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 EFNA4P52798 201 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 BTN1A1Q13410 526 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 ZNF833PQ6ZTB9 187 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 H2BFWTQ7Z2G1 175 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 BAP18Q8IXM2 172 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 TMEM252Q8N6L7 170 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 ZNF525Q8N782 197 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 CD300LFQ8TDQ1 290 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 IGFBPL1Q8WX77 278 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 CSMD1Q96PZ7 3565 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 USP9YO00507 2555 aaPredicted RBP15.01□□□□□ -0.01
USP39-201ENST00000323701 PIGBOS1A0A0B4J2F0 54 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 SYNGR2O43760 224 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 SPINK9Q5DT21 86 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 GPR157Q5UAW9 335 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 TMED6Q8WW62 240 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 MRPL20Q9BYC9 149 aaKnown RBP15.01□□□□□ -0.01
USP39-201ENST00000323701 PATZ1Q9HBE1 687 aaKnown RBP15.01□□□□□ -0.01
USP39-201ENST00000323701 COA4Q9NYJ1 87 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 PRELID3BQ9Y3B1 194 aa15.01□□□□□ -0.01
USP39-201ENST00000323701 A0A087X0M5 115 aa15□□□□□ -0.01
USP39-201ENST00000323701 A0A1B0GX30 115 aa15□□□□□ -0.01
USP39-201ENST00000323701 KRBOX1C9JBD0 128 aa15□□□□□ -0.01
USP39-201ENST00000323701 RBFOX2O43251 390 aaKnown RBP eCLIP15□□□□□ -0.01
USP39-201ENST00000323701 OR2B8PP59922 312 aa15□□□□□ -0.01
USP39-201ENST00000323701 TNFRSF9Q07011 255 aa15□□□□□ -0.01
USP39-201ENST00000323701 ABHD12Q8N2K0 398 aa15□□□□□ -0.01
USP39-201ENST00000323701 ZNF596Q8TC21 504 aa15□□□□□ -0.01
USP39-201ENST00000323701 TMEM133Q9H2Q1 129 aa15□□□□□ -0.01
USP39-201ENST00000323701 POLQO75417 2590 aa15□□□□□ -0.01
USP39-201ENST00000323701 TPT1P13693 172 aaKnown RBP15□□□□□ -0.01
USP39-201ENST00000323701 THBS3P49746 956 aa15□□□□□ -0.01
USP39-201ENST00000323701 VAMP2P63027 116 aa15□□□□□ -0.01
USP39-201ENST00000323701 EIF4E3Q8N5X7 224 aaKnown RBP15□□□□□ -0.01
USP39-201ENST00000323701 TMEM217Q8N7C4 229 aa15□□□□□ -0.01
USP39-201ENST00000323701 LY6G5BQ8NDX9 201 aa15□□□□□ -0.01
USP39-201ENST00000323701 C8orf46Q8TAG6 207 aa15□□□□□ -0.01
USP39-201ENST00000323701 ZDHHC16Q969W1 377 aa15□□□□□ -0.01
USP39-201ENST00000323701 ST6GALNAC6Q969X2 333 aa15□□□□□ -0.01
USP39-201ENST00000323701 RBKSQ9H477 322 aa15□□□□□ -0.01
USP39-201ENST00000323701 PLA2G2EQ9NZK7 142 aa15□□□□□ -0.01
USP39-201ENST00000323701 HSPB7Q9UBY9 170 aa15□□□□□ -0.01
USP39-201ENST00000323701 IGHV4-39P01824 125 aa14.99□□□□□ -0.01
USP39-201ENST00000323701 PVALBP20472 110 aaPredicted RBP14.99□□□□□ -0.01
USP39-201ENST00000323701 GPR6P46095 362 aaPredicted RBP14.99□□□□□ -0.01
USP39-201ENST00000323701 UBE2KP61086 200 aa14.99□□□□□ -0.01
USP39-201ENST00000323701 OR10X1Q8NGY0 326 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms