RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 RCC1LQ96I51 464 aaKnown RBP14.66□□□□□ -0.06
GABRB3-202ENST00000311550 WFIKKN1Q96NZ8 548 aa14.66□□□□□ -0.06
GABRB3-202ENST00000311550 OR8B2Q96RD0 313 aa14.66□□□□□ -0.06
GABRB3-202ENST00000311550 YTHDF2Q9Y5A9 579 aaKnown RBP14.66□□□□□ -0.06
GABRB3-202ENST00000311550 APCSP02743 223 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 TRGC1P0CF51 173 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 ACP1P24666 158 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 C1QTNF5Q9BXJ0 243 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 WASHC3Q9Y3C0 194 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 HCP5Q6MZN7 132 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 AHRRA9YTQ3 701 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 HIST1H1BP16401 226 aaKnown RBP14.65□□□□□ -0.06
GABRB3-202ENST00000311550 UCP1P25874 307 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 RTP5Q14D33 572 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 STPG1Q5TH74 334 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 STARD4Q96DR4 205 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 FBLN5Q9UBX5 448 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 LNP1A1A4G5 178 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 CEACAM18A8MTB9 384 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 MFAP2P55001 183 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 REPIN1Q9BWE0 567 aaKnown RBP14.65□□□□□ -0.06
GABRB3-202ENST00000311550 COA4Q9NYJ1 87 aa14.65□□□□□ -0.06
GABRB3-202ENST00000311550 OR4A8P0C604 315 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 LINC00869P0C866 280 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 MMDQ15546 238 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 RTN4RL2Q86UN3 420 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 OR8I2Q8N0Y5 310 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 ZNRF1Q8ND25 227 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 QTRT1Q9BXR0 403 aaKnown RBP14.64□□□□□ -0.07
GABRB3-202ENST00000311550 SRP14P37108 136 aaKnown RBP14.64□□□□□ -0.07
GABRB3-202ENST00000311550 FAM209BQ5JX69 171 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 RNF144BQ7Z419 303 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 GCSAMQ8N6F7 178 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 OR4C5Q8NGB2 326 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 OR1P1Q8NH06 330 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 NAGKQ9UJ70 344 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 C12orf77C9JDV5 145 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 SP9P0CG40 484 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 COX19Q49B96 90 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 IGKV1D-13A0A0B4J2D9 117 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 BMPR1BO00238 502 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 IGKV1-13P0DP09 117 aa14.64□□□□□ -0.07
GABRB3-202ENST00000311550 TMSB15BA0A087X1C1 80 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 CCL1P22362 96 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 ZNF385CQ66K41 422 aaPredicted RBP14.63□□□□□ -0.07
GABRB3-202ENST00000311550 TCF19Q9Y242 345 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 PTGDSP41222 190 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 EIF4E3Q8N5X7 224 aaKnown RBP14.63□□□□□ -0.07
GABRB3-202ENST00000311550 NHLRC2Q8NBF2 726 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 ZNF596Q8TC21 504 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 RPL39P5Q59GN2 51 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 ZNF506Q5JVG8 444 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 FNDC1Q4ZHG4 1894 aaPredicted RBP14.63□□□□□ -0.07
GABRB3-202ENST00000311550 FAM89BQ8N5H3 189 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 HSPB9Q9BQS6 159 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 SCN8AQ9UQD0 1980 aa14.63□□□□□ -0.07
GABRB3-202ENST00000311550 SNRNP200O75643 2136 aaKnown RBP14.63□□□□□ -0.07
GABRB3-202ENST00000311550 TCAPO15273 167 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 SMPD2O60906 423 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 CDX1P47902 265 aaPredicted RBP14.62□□□□□ -0.07
GABRB3-202ENST00000311550 ASCL5Q7RTU5 278 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 CXorf65A6NEN9 183 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 IGHV3-48P01763 117 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 FXYD3Q14802 87 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 FGFBP3Q8TAT2 258 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 FGF11Q92914 225 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 CELA3BP08861 270 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 HIST1H1EP10412 219 aaKnown RBP14.62□□□□□ -0.07
GABRB3-202ENST00000311550 HSPE1P61604 102 aaKnown RBP14.62□□□□□ -0.07
GABRB3-202ENST00000311550 VWA1Q6PCB0 445 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 PQLC2Q6ZP29 291 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 C1orf174Q8IYL3 243 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 C5orf17Q8NAS9 161 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 FDCSPQ8NFU4 85 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 NLRC5Q86WI3 1866 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 AGAP20933 346 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 WDFY1Q8IWB7 410 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 OR51M1Q9H341 326 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 DEPPQ9NTK1 212 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 RNF24Q9Y225 148 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 RPL8P62917 257 aaKnown RBP14.62□□□□□ -0.07
GABRB3-202ENST00000311550 DCTN5Q9BTE1 182 aa14.62□□□□□ -0.07
GABRB3-202ENST00000311550 C5orf63A6NC05 138 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 TMUB1Q9BVT8 246 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 PLSCR2Q9NRY7 297 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 CBY3A6NI87 242 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 C17orf98A8MV24 154 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 SRP19P09132 144 aaKnown RBP14.61□□□□□ -0.07
GABRB3-202ENST00000311550 IBA57Q5T440 356 aaKnown RBP14.61□□□□□ -0.07
GABRB3-202ENST00000311550 STXBP6Q8NFX7 210 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 IGLV3-32A0A0A0MS00 114 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 TEX50A0A1B0GTY4 177 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 DIRC3C9JPN6 131 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 KBTBD11O94819 623 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 FHL1Q13642 323 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 Q6ZT83 130 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 JPT1Q9UK76 154 aa14.61□□□□□ -0.07
GABRB3-202ENST00000311550 PQLC2LA1A4F0 135 aa14.6□□□□□ -0.07
GABRB3-202ENST00000311550 F8VVB4 439 aa14.6□□□□□ -0.07
GABRB3-202ENST00000311550 F8VWA3 439 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms