RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 FRS3O43559 492 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ALOX12BO75342 701 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 GJB5O95377 273 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ATP5EP56381 51 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF260Q3ZCT1 412 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 C6orf132Q5T0Z8 1188 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM78Q5T7P6 136 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 SPACA9Q96E40 222 aaPredicted RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF479Q96JC4 524 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 NRXN3Q9Y4C0 1643 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 YPEL1O60688 119 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 RAMP1O60894 148 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 GLULP15104 373 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 HTR6P50406 440 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 VGLL4Q14135 290 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 TPTE2P1Q5T6R2 138 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 CADM4Q8NFZ8 388 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 JMJD1CQ15652 2540 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 SSTR5P35346 364 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM177Q53S58 311 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 MOB3BQ86TA1 216 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 NOXO1Q8NFA2 376 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 MYEOVQ96EZ4 313 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 ISG20L2Q9H9L3 353 aaKnown RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 GPR27Q9NS67 375 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 A0A1B0GX78 115 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 FAM90A9PA6NNJ1 464 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 CYB561P49447 251 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 SLC25A48Q6ZT89 311 aaKnown RBP4.23□□□□□ -1.73
CSMD3-201ENST00000297405 SAXO1Q8IYX7 474 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 CACNG8Q8WXS5 425 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 HARBI1Q96MB7 349 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 CST9LQ9H4G1 147 aa4.23□□□□□ -1.73
CSMD3-201ENST00000297405 PGFP49763 221 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 MESP2Q0VG99 397 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 CEACAM21Q3KPI0 293 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF658BQ4V348 819 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 UTF1Q5T230 341 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 CLEC4DQ8WXI8 215 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 SCGB3A1Q96QR1 104 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 KLKB1P03952 638 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 CBLN1P23435 193 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 SOX4Q06945 474 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF252P-AS1Q0IIN9 211 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 THAP3Q8WTV1 239 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 ABHD3Q8WU67 409 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 THOC3Q96J01 351 aaKnown RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 ALKBH3Q96Q83 286 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 SLC25A37Q9NYZ2 338 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 MRGPREQ86SM8 312 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 CYB5D2Q8WUJ1 264 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 H3BP45 60 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 HYPMO75409 117 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 GALNSP34059 522 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 C12orf49Q9H741 205 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 DHHO43323 396 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 NPPBP16860 134 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 OR51G1Q8NGK1 321 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 PFN4Q8NHR9 129 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 TAF15Q92804 592 aaKnown RBP eCLIP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 MS4A5Q9H3V2 200 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 LPAR2Q9HBW0 351 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 PAGE4O60829 102 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 MAGEA5P43359 124 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 NPC2P61916 151 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 C2orf68Q2NKX9 166 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 LY6G5CQ5SRR4 150 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 OR1B1Q8NGR6 318 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 CSTL1Q9H114 145 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 COL5A1P20908 1838 aaPredicted RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 H0YGG7 62 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 H3BNC9 293 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 K7N7A8 449 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 RUNX1Q01196 453 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF79Q15937 498 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 SLC16A11Q8NCK7 471 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 OR4C13Q8NGP0 309 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM40Q8WWA1 233 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 AGMATQ9BSE5 352 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 DAPP1Q9UN19 280 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 PPIAL4DF5H284 164 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 K7EMI3 77 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 HBDP02042 147 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 TNFRSF19Q9NS68 423 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 FAM157AC9JC47 383 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 EFSO43281 561 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 ICOSLGO75144 302 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 NNATQ16517 81 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 SFTA2Q6UW10 78 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 C9orf40Q8IXQ3 194 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 SIRT6Q8N6T7 355 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 CCL16O15467 120 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 GNG7O60262 68 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 CEACAM6P40199 344 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 MRPS21P82921 87 aaKnown RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 PDE6HQ13956 83 aa4.22□□□□□ -1.73
CSMD3-201ENST00000297405 EXOSC7Q15024 291 aaKnown RBP4.22□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM99Q8N816 258 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms